Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0419 ATGGATCATGTTAGTGAGATTCAACATGAATATAACAAACGAGTAAAAATTGAAGGATGTTACGAGACAATCGTGTCTAATCCCAATGCAATATGGAAAAGTGATAGCATTCTAACATTCTACCTCCCTTTCTTTACAGCCCAAGTTGCTCTCATGTTGATCACCACTCGTTCTGCATACTACATCCTGAGACCCTTGAATCAACCTCTCATTGTTGTTGAGATTTTGATAGGGTTCATGATAAGCCCGGAGATAATTGGGGGAACACCTTTTTATGGATCATCACTTGTCCCGCTAAGGGCAATAATTCCAATTGAAACCATGACACACTTTGGGCTGGTTTTCTTTGTTTTCATTGCTGGTTTGGACATGAATTTAGACACAATCCTACACGCAAGGAAGAAAGCTACAAGCATTGCTGTTGCAGGCATTATAATTCCAATGGCAATGGGGAGTGGAATATATTATTTGCTTCAAAGCATGTACAAGGGATCTCATGAGAATTTGGCAAATCACAACACATTCAAAGCATATTTGTTTTGGACCTTAACATACAGTGTCACTGGTTTCCCCATCGTTTCTCAAATCCTCACAAACCTCAAGCTCCTCTACACAGGTCTAGGACGAGTGGCCTTAACAGCAGCTATGATCACTGATTTCTACAACTGGGTCACTTTTGCGTTGTTGATTCCATATGCAATGAATGAAAAAACTGCCATCTACTCAGTGATCGCCACCATTGTGTTTGTCCTGTTTTGCTTCATTATCCTTCGCCCTTATATGGAGAAGTTGATCATCCGCAAAACCACTCACAATGATTGGGACAATTATCAGTTGTTGTTTGTGGTCATGGGAGCTTATGCTTGTGCATTCATTACAGATATTTTGGGGGCACACCCTGTTGTTGGGGCTCTTGTTTATGGAATCATCATACCTCGTGGGAAATTCACTGAGATGCTGATAAATAAGTCAGAGGATCTTGGGGTTGTTTATTTGGCTCCAATCTTCTATGGTAACTGTGGCATAAGACTCAGGTTCTTGTATACTGTTAGAACACAAGGTGTCACATTGGTCATGCTAACTATGTTCTTGACATGTATACCAAAGATTTTAAGCACACTAATAGCAACTCAATTTTATGGCATGTCTATTCTTGATGGTGTGGCTGTTGGGGTGCTTATGAACACCAAAGGTGTCCTACCCTTAATAATGCTCAACATAGCTTGGGACGAGCAGATTTTGAGTGCGGAGTCCTTCTCAATTTTGACAGTAACAGTTCTCATGATGACTATCATTGTGCCAATAATTATCAATGTCATATACAAGCCAAGAAAGCTTCACAGGCAAAACAAATTAAGGACTATACAGAATTTAAAGGTTGATTCAGAACTTCGAGTTTTGGCCTGTGTCCATAACCCTCGCCAAACCACAGGAATCATCAACATCCTCGAGGCGTGTAATTCAAATAAACTTTGTCCACTACGTGTGATTGCTCTTCAACTTGTTGAAATGACAGGAACAACCACATCCCTTTTGGTTTCCCACATCAACCATCATAACATGCAACAAAGTGGAGCACATAATTCCCTTACCGAATCAGAACAAGACTTGGAAACCATCGCAAATGTTTTTGCAGCTTATGCAGAGGAAACTGAGAACACCACCAAGGTGGAGACCCTTGCTGCCGTGTCCCCCTACTCAACAATTCATGAGGACATATATAATGTAGCGCAAGAAAAGCAAGCAACTTTGATTATCCTCCCTTTTCACAAGCAATCAAGCTTAGAGGGTATCCTAGAAGATTCCAACTCTGCAATCAAGGACATAAACCAGAATGTCATAAGAGATGCGCCTTGCTCTGTTGGAATCTTCGTTGATCGCGGAATTGGGTCATTGTTCAAAGTGGATTTGCGTGTGCTCATGCTTTTCATTGGTGGTCCTGATGATCGAGAAGCATTAGCCGTTGCGTGGAGGATGTCAAAGCATCAAAGGATTCATCTCTCTGTTGTGAGGATCCTTTTATCAGGGGAAGCTGCAGAAGCAGATTCTTCATCATCATCGCATGTAGAATCTAAAGGGTTGTTATCTGCAGAAGTGGACAATGAAAAGCAGAAGGAGTTGGATGATGAGTATGTGAATTCATTTAGACTCAAGGCAGTGAACAATGAAGATTCTATAAAATATTTAGAAAAAGAGGTTCATTCTGCTAATGATATTTCAGAGGTACTTAATCAAATGGATCAAATTGGGTGTGATTTGTACATCTTAGGACAAGGGACTGGTAGGAACTCCATGGTCTTTTCAAATTTGATGAAACAGACTGATTGCCCAGCACTTGGAGTTATAGGGGACATGGTGGCATCAAATAACTTTGGTTCATGCTCTTCACTCCTTGTTGTGCAGCAATATGGGTTTGAGAGGATAGAGTTTGAGACTAGCACTCAGCAATCTAGTGAAGCATCTGCAAATAATGATGGTTCTGGGGAACTTTTTGTGAAGGTAGAATAG 2508 0.4083 MDHVSEIQHEYNKRVKIEGCYETIVSNPNAIWKSDSILTFYLPFFTAQVALMLITTRSAYYILRPLNQPLIVVEILIGFMISPEIIGGTPFYGSSLVPLRAIIPIETMTHFGLVFFVFIAGLDMNLDTILHARKKATSIAVAGIIIPMAMGSGIYYLLQSMYKGSHENLANHNTFKAYLFWTLTYSVTGFPIVSQILTNLKLLYTGLGRVALTAAMITDFYNWVTFALLIPYAMNEKTAIYSVIATIVFVLFCFIILRPYMEKLIIRKTTHNDWDNYQLLFVVMGAYACAFITDILGAHPVVGALVYGIIIPRGKFTEMLINKSEDLGVVYLAPIFYGNCGIRLRFLYTVRTQGVTLVMLTMFLTCIPKILSTLIATQFYGMSILDGVAVGVLMNTKGVLPLIMLNIAWDEQILSAESFSILTVTVLMMTIIVPIIINVIYKPRKLHRQNKLRTIQNLKVDSELRVLACVHNPRQTTGIINILEACNSNKLCPLRVIALQLVEMTGTTTSLLVSHINHHNMQQSGAHNSLTESEQDLETIANVFAAYAEETENTTKVETLAAVSPYSTIHEDIYNVAQEKQATLIILPFHKQSSLEGILEDSNSAIKDINQNVIRDAPCSVGIFVDRGIGSLFKVDLRVLMLFIGGPDDREALAVAWRMSKHQRIHLSVVRILLSGEAAEADSSSSSHVESKGLLSAEVDNEKQKELDDEYVNSFRLKAVNNEDSIKYLEKEVHSANDISEVLNQMDQIGCDLYILGQGTGRNSMVFSNLMKQTDCPALGVIGDMVASNNFGSCSSLLVVQQYGFERIEFETSTQQSSEASANNDGSGELFVKVE* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0419 835 PANTHER CATION/H + ANTIPORTER 28 813 - -
Lja6g0419 835 MobiDBLite consensus disorder prediction 814 835 - -
Lja6g0419 835 PANTHER CATION/H+ EXCHANGER 3 28 813 - -
Lja6g0419 835 Gene3D - 45 451 IPR038770 -
Lja6g0419 835 Pfam Sodium/hydrogen exchanger family 51 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g0419 835 Gene3D - 494 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0419 Lja-Chr6 10156288 10159621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0419 20 803 Antiporter Super Family AT2G13620 37.028 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0419 - - gmx:100802381 1071.23