Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0417 ATGGATCATGTTAGTGACATTCAACATGAATATAACAAACGAGTAAAAGTTGAAGGATGTTACGAGACAATCGTGACTAATCCCAATGCAATATGGAAAAGTGATAGCATCCTAACATTCTACCTCCCTTCCTTTGCAACCCAAATTGCTATCATGTTGATCACCACTCGTTCTGTATACTACATCCTCAGACCCTTGAATCAACCTCTTATTGTTGTTGAGATTTTGATAGGGTTCATGATAAGCCCAGAGATAATTGGGGGAACACCTTTTTTTGGATCTTCAGTTGTTCCTCTAAGGGCAATGATGCCAATTGAAACCATGACACATTTTGGGCTGGTTTTCTTTGTTTTCATTGCTGGTTTGGACATGAATTTAGACACTATCCTACACGCAAGGAAGAAAGCTACAAGCATTGCTGTTGCAGGCATTATAATTCCAATGGCAATGGGGAGTGGAATATATTATTTGCTTCAAAGCATGTACAAGGGATCTCCTGAGAAGTTGGCACATCACAACACATTCAAAGCATATTTGTTTTGGACCTTAACATACAGTGTCACTGGTTTCCCCATCGTTTCTCAAATCCTGGCACACCTCAAGCTTCTCTACACAGGTCTAGGACGAGTGGCCTTAACAGCAGCTATGATCACTGATTTTTACAACTGGGCCACTTTTGCATTGTTGATTCCATATGCAATGAATGAAAAAACTGCCATTTACTCGGTGATCGCCACCATTGTGTTTGTCTTATTTTGCTTCATTGTCCTTCGCCCTTATATGGAGCGGTTGATCATCCGCAAAACCAATCACAATGAATGGGACAATTATCAGTTGTTGTTTGTGGTCATGGGAGCTTATGCTTGTGCATTCATTACAGATATTTTGGGGACACATCCTGTTGTTGGGGCTCTTGTTTATGGAATCATCATACCTCGTGGGAAATTCACTGAGATGCTGATAAATAAGTCAGAGGATCTTGGGGTTGTTTATTTGGCTCCAATATTCTATGGTAACTGCGGCATGAGACTCAGGTTCTTGTATGCTGTCAGAACACAAGGTGTCACATTGGTCATGCTAACTATGTTCTTGACATGTGTCCCAAAGATTTTAAGCACACTAATAGCAACTCAATTCTATGGCATGTATGTTCTTGATGGTGTGGCTGTTGGGTTGCTTATGAACACCAAAGGTGTCTTACCCTTAATAATGCTCAACATAGCCTGGGACGAGCAGATTTTGAGTGCGGAGTCCTACTCAATTTTAACAGTAACAGTTCTCATGATGACTATCATTGTGCCAATAATCATCAATGCCATATACAAACCAAGAAAGCTTCACAGGCAAAACAAGTTAAGGACTATACATAATTTAAAGGATGATTCAGAGCTTCGAGTTTTGGCTTGTGTCCATAACCCTCGCCAAACTACAGGAATCATCAACATCCTCGAGGCGTGTAATTCAAATAAACTCTCTCCACTACGTGTGATTGCTCTTCAACTTGTTGAAATGACAGGAACAACCACATCCCTTTTGGTTTCCCACATCAACCATCATAACATGCAACAAAATGGAGCACATAATTCCCTTACCAAATCAGAACAAGATTTGGAAACCATCACAAATGTTTTTGCAGCTTATGCAGAGGAAACTGAGAACACCCCCAAGGTGGAGACCCTTGCTGCCGTGTCCCGCTACTCAACAATTCATGAGGACATATACAATGTAGCACAAGAAAAGCAAGCAACTTTGATTCTCCTCCCTTTTCACAAGCAATCAAGTTTAGAGGGTATCCTAGAAAATTCCAATTCTGCAATCAAGGACATAAACCAGTATGTCATGAGAGATGCGCCTTGCTCTGTTGGAATCTTCGTTGATCGTGGAATTGGTTCGTTGTTCAAAGTGGATTTGCGTGTGCTCATGCTTTTCATTGGCGGTCCTGATGACCGTGAAGCATTAGCCGTTGCGTGGAGGATGTCAAAGCATCAAAGGGTTCATCTGTCTGTTGTGAGGATTCTTTTATCAGGGGAAGCTGCAGAAGCAAATTCATCATCTTCATCGCATGTTGAATCTAAAGGGTTGTTATCTGCAGAAGTGGACAATGAAAAGCAGAAGGAGTTGGATGAAGAGTATATGAATTCATTTAGACTCAAGGCAGTGAATAATGAAGATTCTATAAAATATTTAGAAAAAGAGGTTCATTCTCGTGATGATATTTCAGAGGTACTTAATCAAACAGATCAAATTGGATGTGATTTGTTCATCTTAGGACAAGGTACTGGTAGGAACTCCGTGGTCTTTTCGAATTTGATGAAACATACCGATTGCCCAGAACTTGGAGTTATAGGGGACATGGTGGCATCAAATAACTTTGGTTCCTGCTCTTCACTCCTTCTTGTGCAACAATATGGGTTTGAGAGGATAGAATTTGAGACTAGCACTAAACAATCTGGTGAAGCATCTTCAAATAAAGATGGTTCAGAGGCACTTTTTGTGAAGATAGATTAG 2508 0.4055 MDHVSDIQHEYNKRVKVEGCYETIVTNPNAIWKSDSILTFYLPSFATQIAIMLITTRSVYYILRPLNQPLIVVEILIGFMISPEIIGGTPFFGSSVVPLRAMMPIETMTHFGLVFFVFIAGLDMNLDTILHARKKATSIAVAGIIIPMAMGSGIYYLLQSMYKGSPEKLAHHNTFKAYLFWTLTYSVTGFPIVSQILAHLKLLYTGLGRVALTAAMITDFYNWATFALLIPYAMNEKTAIYSVIATIVFVLFCFIVLRPYMERLIIRKTNHNEWDNYQLLFVVMGAYACAFITDILGTHPVVGALVYGIIIPRGKFTEMLINKSEDLGVVYLAPIFYGNCGMRLRFLYAVRTQGVTLVMLTMFLTCVPKILSTLIATQFYGMYVLDGVAVGLLMNTKGVLPLIMLNIAWDEQILSAESYSILTVTVLMMTIIVPIIINAIYKPRKLHRQNKLRTIHNLKDDSELRVLACVHNPRQTTGIINILEACNSNKLSPLRVIALQLVEMTGTTTSLLVSHINHHNMQQNGAHNSLTKSEQDLETITNVFAAYAEETENTPKVETLAAVSRYSTIHEDIYNVAQEKQATLILLPFHKQSSLEGILENSNSAIKDINQYVMRDAPCSVGIFVDRGIGSLFKVDLRVLMLFIGGPDDREALAVAWRMSKHQRVHLSVVRILLSGEAAEANSSSSSHVESKGLLSAEVDNEKQKELDEEYMNSFRLKAVNNEDSIKYLEKEVHSRDDISEVLNQTDQIGCDLFILGQGTGRNSVVFSNLMKHTDCPELGVIGDMVASNNFGSCSSLLLVQQYGFERIEFETSTKQSGEASSNKDGSEALFVKID* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0417 835 PANTHER CATION/H + ANTIPORTER 28 812 - -
Lja6g0417 835 PANTHER CATION/H+ EXCHANGER 3 28 812 - -
Lja6g0417 835 Gene3D - 495 781 - -
Lja6g0417 835 Gene3D - 44 451 IPR038770 -
Lja6g0417 835 Pfam Sodium/hydrogen exchanger family 51 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0417 Lja-Chr6 10130264 10133610 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0417 20 803 Antiporter Super Family AT2G13620 36.981 4.73e-179 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0417 - - gmx:100802381 1091.26