Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0416 ATGGCAAACTACTATGATATTGATGACATTATGGTAGAGGAAGAGATTGTGTCGGTGGTATTTCAGAAGCCAGCATCTGGAGTGGGAATAGATCCAAGTTCTGAGACCGACTCTATTGAAGCAGGTTCAAAAGTCGAATTGCCTTTTTGGCTTGCTCATGAATTACAGTTGAGACAAGCAGTATCAGTAAATGTTCCCCCTTGTTTCAATCAAAAAACAAGGCTAGAGATCCAAGCTGATTCTGCATCTGTGGATCTCAAGTCCAGATGTCAATTCTTTTATGAATTTGGTTGCAAGATAGCACCGATAGTTGGCGACAGAACCATTGGGTTTCTATTATTATCTGCATTTAAGAGTAGGTACAAGGAAGTCCTCACAAAGGCACATACTGCAGCATTTGCAGCTGGCTCCAAATTTTGGACTATTCTGACAAAAGAAGAGATCAATTTGTATGAGGCAGCTCAATCTGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGGCCCAGATTTCAGATATCTAATGTTCTGGGAAGAAAGAGAAAATCAACTGAATAG 558 0.4122 MANYYDIDDIMVEEEIVSVVFQKPASGVGIDPSSETDSIEAGSKVELPFWLAHELQLRQAVSVNVPPCFNQKTRLEIQADSASVDLKSRCQFFYEFGCKIAPIVGDRTIGFLLLSAFKSRYKEVLTKAHTAAFAAGSKFWTILTKEEINLYEAAQSAMASFKKWRMGGPRFQISNVLGRKRKSTE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0416 185 CDD GINS_A_psf3 61 167 - -
Lja6g0416 185 Pfam GINS complex protein 45 148 IPR021151 -
Lja6g0416 185 Gene3D - 1 167 IPR038437 -
Lja6g0416 185 PANTHER UNCHARACTERIZED 1 184 IPR010492 -
Lja6g0416 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Lja6g0416 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0416 Lja-Chr6 10119777 10129490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0416 1 184 Core DNA Replication Machinery Family AT3G55490 67.935 1.94e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0416 K10734 - gmx:100799874 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0416 6 10119777 10129490 Lja6g0416 6 10119777 10129490 ECH