Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0405 ATGGAGAACTATGAGCTTGTGAAGGATATAAGTGAGGGATTTCACGGGGTGACAAGACTCATGCGGCACAAAGAAACCAAACACCTTGTTGCAGTAAAATACATGCCAAGGGGTGACAAGATTAAGGAGTATGTTGAAAGGGAAATTATGAACCATAGAAATCTCTGCCATCCGCATATTATTGGGTTCAAGGAGGTAGTTTTAACTCCAACACATATTGCAATAGTATTGGAGTATGCACCGGGAGGAGATCTGTTTGACCATATTTGCAATCGTGGACGAATATGTGAAGACGAAGCTCGATATTTCTTCCAACAGATCATTTCAGGAGTTAGCTATTGTCACTACAAGGAAATATGTCATCGAGACCTTAAACTGGAGAACATTTTAGTGGATGGCATAAAGCTTAAAATTTGTGATTTTGGTCATTCTAAGTCATATCTACTCCATTCAAGGCCTAAATCAATGATTGGAACTCCAAAGTACATTGCACCTGAGGTTTTCTCTGGCAAAGAATATGATGGAAAGCTAGCAGATGTATGGTCCTGTGGAGTGATACTTTATGTAATGCTGGTGGGAGCATTTCCATTTGATGACGAAGAGAATAATCATAATTTCAAGAAAATTATGAATCGAATTCTGGCTGTTCAATACAAGATCCCCAACTATGTTCACATATCTCAAGACTGTAAAGATCTAATATCTCGCATTTTTGTGGCAAATCCGGCAAAGAGAATCACCATCAAAGAAATCAAGTCTCACCCATGGTTTTTAAAGAACTTAGTTAAGGAATTGAAAGATGAGGCTCAAGCTGTCTATTACAAAAAGGAAAACTCAATCTCTTATAAACAAAGTACAAGGGACATCAGGAATATTGTTAACATGGCCAAGACTCTGCCTGCAACTTATAGGCCAACTCCAAACAATGTCAAACCATTGCCTGCAACTTCAAACAATGTCAAACCTGTGCCTGCAACTTCTGGTCCAGTTCTATTGGATTTGGGGAACCTTAGCTTGAGGTGTCGAAGAGGAAGAAGCCATTAG 1044 0.3918 MENYELVKDISEGFHGVTRLMRHKETKHLVAVKYMPRGDKIKEYVEREIMNHRNLCHPHIIGFKEVVLTPTHIAIVLEYAPGGDLFDHICNRGRICEDEARYFFQQIISGVSYCHYKEICHRDLKLENILVDGIKLKICDFGHSKSYLLHSRPKSMIGTPKYIAPEVFSGKEYDGKLADVWSCGVILYVMLVGAFPFDDEENNHNFKKIMNRILAVQYKIPNYVHISQDCKDLISRIFVANPAKRITIKEIKSHPWFLKNLVKELKDEAQAVYYKKENSISYKQSTRDIRNIVNMAKTLPATYRPTPNNVKPLPATSNNVKPVPATSGPVLLDLGNLSLRCRRGRSH* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0405 347 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0405 347 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lja6g0405 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lja6g0405 347 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0405 347 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 304 - -
Lja6g0405 347 SUPERFAMILY Protein kinase-like (PK-like) 1 321 IPR011009 -
Lja6g0405 347 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g0405 347 Gene3D Transferase(Phosphotransferase) domain 1 81 265 - -
Lja6g0405 347 PANTHER SERINE/THREONINE KINASE 2 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0405 Lja-Chr6 10025568 10030116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0405 4 260 CBL-interacting serine-threonine protein kinases AT4G24400 42.007 1.06e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lja6g0405 Pkinase 5.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0405 K14498 - jre:109007013 444.506