Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0356 ATGTCTCCGTCGGCCGGAGTCCACGTCCCCCTCCTACCGGGATCCAAACCAGCGGCTCCGCCGGCGTCCGTATCCGGCGCCGTTTTCAATGTCGCCACCAGCATCGTCGGCGCCGGAATCATGTCGATCCCGGCGCTCCTGAAGGTTCTCGGTGTGATCCCCGCTTTCGCCATGATTCTGGTCGTCGCCGTGCTGGCGGAAATCTCCGTCGACTATCTCATGCGGTTCACGCATTCCGGCGAAACCAAGACCTACGCCGGCGTCATGAGGGAGGCGTTTGGGCCGCCCGGAGCTTTAACCGCGCAAGTTTGTGTGATAATCAACAACCTGGGGGGTCTAATTCTCTACCTAATCATCATCGGGGATGTGCTATCTGGGAACCACAGCGGAGATGAAGTGCACTTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTCGCCATGTTTGTCACCTCGGTCTTGGTTATGCTTCCGTTGGTCTTGTACCGGCGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTATCAACTTTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGATTGGCTATTATTGCTATGGTGCAAGGAAAAACACAGACTCCTAGATTGTTCCCTCAGTTAGACTACCAAACCTCCTTCTTTGATCTCTTCACTGCAGTTCCTGTTGTAGTCACAGCCTTCACATTTCATTTTAATGCAGTTCGATTAGCATTAATGCTTTGTGCTGTTATCTACTTTGTGATTGGACTATTTGGGTACTTGTTATTTGGGGATTCAACTCAATCAGACATTCTCATCAATTTTGACCAGAGTGCTGATTCTGCAGTTGGTTCCTTTCTCAATAGCTTAATCCGTGTAAGCTATGCACTCCATATAATGCTGGTATTCCCTCTATTGAACTTCTCCTTGAGGGCCAATCTTGATGAAATCCTATTCCCCAAGAAGCCTCTGCTAGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGTGCTGCTAGCCTTCTCCTACCTTGCTTCTATAGCAATCCCAGATATTTGGTATTTCTTTCAGTTTTTGGGTTCATCATCTGCAGTTTGCCTTGCCTTCATTTTTCCTGGCATGATTGTTTTAAGGGATGCATATGGTATATCAACAAGAAGGGATAAAATTATAGCACTGGTTATGATAATACTAGCTGTAGTGACAAGTGTGATTGCCATTTCCACCAACATATACAATGCTTTTAGCAGCAAGTCATAA 1263 0.4711 MSPSAGVHVPLLPGSKPAAPPASVSGAVFNVATSIVGAGIMSIPALLKVLGVIPAFAMILVVAVLAEISVDYLMRFTHSGETKTYAGVMREAFGPPGALTAQVCVIINNLGGLILYLIIIGDVLSGNHSGDEVHLGILQQWFGIHWWNSREFAMFVTSVLVMLPLVLYRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTPRLFPQLDYQTSFFDLFTAVPVVVTAFTFHFNAVRLALMLCAVIYFVIGLFGYLLFGDSTQSDILINFDQSADSAVGSFLNSLIRVSYALHIMLVFPLLNFSLRANLDEILFPKKPLLATDNKRFVILTLVLLAFSYLASIAIPDIWYFFQFLGSSSAVCLAFIFPGMIVLRDAYGISTRRDKIIALVMIILAVVTSVIAISTNIYNAFSSKS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0356 420 Pfam Transmembrane amino acid transporter protein 22 407 IPR013057 -
Lja6g0356 420 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 418 - -
Lja6g0356 420 PANTHER AMINO ACID TRANSPORTER 3 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0356 Lja-Chr6 9069597 9072793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0356 1 414 Amino Acid or Auxin Permease AAAP Family AT3G56200 56.582 8.54e-169 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0356 - - gmx:100813056 673.7