Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0349 ATGTTTCAGAAAAAATTTGTTGTCTCCAACCTCAATTCCACTTATGGTTATTTCAAAGTATGTATCAAGAATGACAAAATTGCAGGTTCTTTAGGTGTGTGGCTTGGTGATAATCCATTTAACTTTGTGCTTCCTGTTACATTGTGCCAAATAATTGTAGCCATTTCCGCCTCTCAAATGTTGTACTATGTCCTAAGGCCTCTACAAACACCCAAATTCATCTGTAGCGTCCTTGGCGGAATTCTGCTCGGGCCAACATTTTTAGGGCACAACCATGTGGTTCTAAACACATTGTTCCCTATATATCAAGCTTCATTTCTAATCATTCTATCTAAGATTGGTGCCATATATTTTGTCTTCATCACTTCACTGAAAATGGACATAACCACAACCTTAAAAGCAGGAAAATGTTGCTGGCGCTTTGCTGTGATCCCCTACTTCATTTCTTACTTCGTGACGGCATACCTCTTATCTTTATACAAACCAAGCGGCGGCGGAAGCCCGCATTCAATCCCAAACATCTTCACCGTGAGCAGCTTTGCTGTTGTATCTGAAGCCTTGCTAGAGCTCAACCTCATAACTACTGAGCTAGGGCAGATCGCGTTATATTCTGCCATGATCGGAGAAATATTGTACTGGGGTACCGTAGCGGTTTATACCTATACAACTGATGGAATCTTTTTTTCCCTTGGGTTCTTGATTTGCACATGCTTGTTCATTTTATGGTTTATTTACATCGTACGACCCATGATGAAGAAGATAGTGCAGAGAACGCCGAAAGGGAAGCCAGTAAGGGAAATGGACATTATCATGATAATCCTCGGCGTGCTAGTTATGGCAGCTATAAGTGACGCGATTGGATTGTCTGTTATCATTGGTCCTATGCTTTATGGGTTGGCGATGCCAAATGGAGCGCCCTTGGCGACAACCATTATTGAGAAAAGTGAAACTCTCATTCACCATTTTCTTATGCCTTTTTTCTATATGTATATTGGATTAAACACAGATTTTGGTGGGATAAAAAAGAATTGGAAGAAGGCTCTTGGTTTTCAGAGCATCTTATTTGTCGGGTTCATGGTAAAGGTGATTTCATGTGTGCTGGTTTCACCAACTTATAATATTCAGCGCAGACATAGCGTGGCACTTGGGCTCATTTTGAGCATTAAGGGCATAACAGAACTCATATACTTTTCTAGACTCAAGAAAGTCCAGATAATTGATGAGGAAATATTTAGTGAGATGGTGCTCTATGTGGTGCTGATGACCGCAATATGCATACCCTTAATCAAGTACTTGTACAAGTATCGTGCTCGTGTGCTGACAACCTCAAACATCCATGAACGGCTTGTGAGAACGATCCAAAACGCTCCAGAAAACAGCGAGTTTAACATAATTTCATGCGTGCACAATGATGGAAACGTGCATAGCATGATCGCCCTTCTAGAAGCTTTCAACCCAACACGAGAAAGTCCCATAGATGTCTACGTGATTCATCTCATTGAGCTCTTGGGTAAAAGTACCCCCATCCTCCTTCCCATTCACACGAAAAACAATAGATCATTGTCCACAAACTACCCCGACACCAACCACATCCTCCGCGCCTTCGAAAACTACTCTAAAAACTCTAAAGGTGCAGTCACAATTCTCCCATACATCAACGTTGCCCCATACAATAACATCCATGAGGCTGTTTGCAACTTGTCCGAGGATAAATTAGTTCATTTCCTCATACTCCCGTTTCACGAAAACGACCAAACCGTAGGAAGCAACATTAACACGTCCATCCGAGATCTCAACGCAAACTTCCAGTCCATCGCGCGATGCACTGTGGGGATCATTGTAGACCGATGTTCACGACTTAACATCATCAAACCCACTGAGTTATCGTTTAATGTCGGCATATTCTTCCTGGGCGGACCTGACGATCGAGAGGCATTAGCCTTAGGTATTCGAATGATGAACTTGGAGCGCCCAAACATGAGGATCACGCACATGTTGGACGACAGTTTGTTTGATGAGTTCAGAGCCAAGAAGATGAAGAATAATAATGTTTCTTTTCATGAAGTTATGGTGGAGGATTGCATGCAGGTGTTGCAGGTGATTCGAGGCTTGAGGGATGAGGATTATGACCTTGTGATGGTGGGGAAGAGACATAACATGGGGAATGTGACAGATGAGGAAATGGTCAATTTCATAGACTATGCAGATCAATTAGGTATTTATGGAGATATGTTGGCCTCCCCGGAATTTTGTAATGGGAGAGTGTCAGTGTTGGTGTTGCAATGTGGTGATAAACGAGTAAAACAATCTGATAAGGTAGGAGTTCCCCAAGTTACAAACTTTTAG 2346 0.4228 MFQKKFVVSNLNSTYGYFKVCIKNDKIAGSLGVWLGDNPFNFVLPVTLCQIIVAISASQMLYYVLRPLQTPKFICSVLGGILLGPTFLGHNHVVLNTLFPIYQASFLIILSKIGAIYFVFITSLKMDITTTLKAGKCCWRFAVIPYFISYFVTAYLLSLYKPSGGGSPHSIPNIFTVSSFAVVSEALLELNLITTELGQIALYSAMIGEILYWGTVAVYTYTTDGIFFSLGFLICTCLFILWFIYIVRPMMKKIVQRTPKGKPVREMDIIMIILGVLVMAAISDAIGLSVIIGPMLYGLAMPNGAPLATTIIEKSETLIHHFLMPFFYMYIGLNTDFGGIKKNWKKALGFQSILFVGFMVKVISCVLVSPTYNIQRRHSVALGLILSIKGITELIYFSRLKKVQIIDEEIFSEMVLYVVLMTAICIPLIKYLYKYRARVLTTSNIHERLVRTIQNAPENSEFNIISCVHNDGNVHSMIALLEAFNPTRESPIDVYVIHLIELLGKSTPILLPIHTKNNRSLSTNYPDTNHILRAFENYSKNSKGAVTILPYINVAPYNNIHEAVCNLSEDKLVHFLILPFHENDQTVGSNINTSIRDLNANFQSIARCTVGIIVDRCSRLNIIKPTELSFNVGIFFLGGPDDREALALGIRMMNLERPNMRITHMLDDSLFDEFRAKKMKNNNVSFHEVMVEDCMQVLQVIRGLRDEDYDLVMVGKRHNMGNVTDEEMVNFIDYADQLGIYGDMLASPEFCNGRVSVLVLQCGDKRVKQSDKVGVPQVTNF* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0349 781 PANTHER CATION/H+ EXCHANGER 3 20 766 - -
Lja6g0349 781 Pfam Sodium/hydrogen exchanger family 52 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g0349 781 PANTHER CATION/H + ANTIPORTER 20 766 - -
Lja6g0349 781 Gene3D - 46 442 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0349 Lja-Chr6 8872345 8876123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0349 32 777 Antiporter Super Family AT2G13620 32.165 4.01e-132 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0349 - - mtr:MTR_3g071880 936.021