Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0334 ATGGCATCTACAATTTCTGAAAACCAGACATTGATATGCCAAGACCCGCACAGCTTTGGTCACTTGCCTATCTGGGCATCAGGCAACCCCCTAGAGTCCCCCACTTCTCTTTTCTTTTTGCAAGTCTCTTTGATTACTGTCATCACACAATTCTTCCATGTTTGCCTCCGGCCACTAGGACAACCCACTGTTGTATCCCAGCTTCTAGGTGGATTGGTACTTGGCCCCTCTGTTTTGGGGGACAGTAAAACGTTGTTGGTGAGAACCTTGTTCCCTATAAGAAGCTTTGTGGTGCTTGAGACAGCTGCATCATTCAGCATCCTCATCTTCTACTTCGTCATGAGCGCGAAGATGGATCCTTTCACGCTGCTGAAAACTGAAAAGAAAGCTGTAACGGTTGGTCTTTCCGTGTTCTTTTTAACGGCCGGAATCCCCACTGCGATGACCTTAGTGTTGATAAAAATTGTTCCCATGGAGGAGGACTTCATAAAAGGCCTCATGATGATAACCCTCTCGCAATCCTTCACCGTGGTCATCAGCATAGCAGTCATCGTGACGGAGCTGAAGATCCTCAACTCTGACATTGGCCGTCTCGCATTGTCCGCAGCAATGTTTGCTGATGTTGTTGGGTTTGGATTGGCAATTGTTATGGTTGCGTTCACTCAGGACGTGCATGGTAGTGTACTGGCACGCATATGGATCCTTCTATCCATAGTCGCGCTCATGGTTCTCATTTTCTATGTGATCCGGCCGGGGACGATATGGATGATAAAGCACTTGAATGGCAAGCCCATTGATGAAATTCATCTAGTCTGTATCATTCTTTCTGCTCTCGTCATTGGATTTTTAAGTGATTTTATTGGGCAACATTTTCCTATGGGAGCGATTATTTTAGGCCTGGCTGTTCCAGCAGGGCCACCTTTAGGATCAGCTTTGACAAATAGATTGGAGACGTTTACAGGGACATTTTTGTATCCAGTTTATCTAGCTGTTTGCGGACTGAAAACTGATATCTTCAAAATCAGTTCCCAATCTGTTTGGATTGTCACTCTCATAGTGGTTGTTGCTTTCTTTGTCAAGATTGGTGCTGTGATGCTACCGGGATATTATACCAAAGTTCCCATGAAAAATTGCTTCATCATTGGGCTCATTCTAAATGGAAGGGGCATAGGGGAAATTACCCTGTACAATGTGTGGAGGGAAAGCAAGATGCTAACGGATGAAGAATTCTCTTTGATGGTGATCTCCATTATAGTGGTAAACGCCATCATAGCGCCGCTCATAAAAATCCTGTATGACCCTACAATTCAATACAATACTGGAAAAAGATGCACGGTTCAACACAACAAGCGAGATTCCGATCTCCGAGTCATGGTGTGTGTTTACGGGAATGAAAATATCCCCACAATGTTGAACATCATAGAAGCTTCCTATGCAAGCATGGAGAGCACAGTAACTGCCACAACACTGGTCCTAGTGGAGCTTATCGGAAGAGCAAGGCCTATTCTCGTTGCTCACCAACCGCACCGGAGGCTTAGGCAAACCCCGTGCATGTCAACTCAACTTGATAACACACTAAGGCAGTACGCGCAGCTGAACGAAGGCTGCGCGTTCATTCAGTCTTTCACATCCATCTCTGACCTCGAAACCATAAGCGACGATGCTTGTAGAATCTCGCTCGACGCGCAGGCCAACATCTTGATCATGCCGTTCCACAAGAGGTGGGAGATAGACGGCACGGTCCAAGTGACCAACAGGAAAGTCCGAATCATGAACCTAAAAGTCCTCGAGCGGGCGCCTTGCTCGGTCGGGATACTCATCGACCGAGGAACCCTAAACGGTTCCCAGTCACTAATGATCGCCAGAGCCACGTTCTACGTCGCCGTGTTCTTCATCGGGGGATGCGACGACGCAGAGGCTCTGGCGTATGCTAGTAGGATGTCGCGACACGAGTGCGTGAGCGTGACAGTGGTGAGGTTCCTCGTGTTTGGAGAAGAGAATTCCAAAGAACGAAGACGTGATAGTGATCTTGTGGTGAAAGATGGGATTGAGATGTCTTCGAGTATTAGGAGGTCGATTGACTATTTTGACCTTGTGATGGTGGGGAGGGAGCACCCACAGACACCATCAGTGTTGCTTAAAGGGCATGAGAAGTGGAGTGAGTGTCCAGAGTTAGGGACAATTGGGGACATGCTAGCGTCGCCGGATTTTGTGACGAAGGCTTCGATACTGGTGGTGCAGCAACAAAGAATAGGAGGGAGGTTTGGGAAACATACGCTGAATTTTATGGGGCCGAATTATAGAGATCAGTTGGTTCATGATGTTCCCATTGATGAGACACCAAGAGGATCATGTGTTATTTCAATGGATAGATATTAG 2379 0.4704 MASTISENQTLICQDPHSFGHLPIWASGNPLESPTSLFFLQVSLITVITQFFHVCLRPLGQPTVVSQLLGGLVLGPSVLGDSKTLLVRTLFPIRSFVVLETAASFSILIFYFVMSAKMDPFTLLKTEKKAVTVGLSVFFLTAGIPTAMTLVLIKIVPMEEDFIKGLMMITLSQSFTVVISIAVIVTELKILNSDIGRLALSAAMFADVVGFGLAIVMVAFTQDVHGSVLARIWILLSIVALMVLIFYVIRPGTIWMIKHLNGKPIDEIHLVCIILSALVIGFLSDFIGQHFPMGAIILGLAVPAGPPLGSALTNRLETFTGTFLYPVYLAVCGLKTDIFKISSQSVWIVTLIVVVAFFVKIGAVMLPGYYTKVPMKNCFIIGLILNGRGIGEITLYNVWRESKMLTDEEFSLMVISIIVVNAIIAPLIKILYDPTIQYNTGKRCTVQHNKRDSDLRVMVCVYGNENIPTMLNIIEASYASMESTVTATTLVLVELIGRARPILVAHQPHRRLRQTPCMSTQLDNTLRQYAQLNEGCAFIQSFTSISDLETISDDACRISLDAQANILIMPFHKRWEIDGTVQVTNRKVRIMNLKVLERAPCSVGILIDRGTLNGSQSLMIARATFYVAVFFIGGCDDAEALAYASRMSRHECVSVTVVRFLVFGEENSKERRRDSDLVVKDGIEMSSSIRRSIDYFDLVMVGREHPQTPSVLLKGHEKWSECPELGTIGDMLASPDFVTKASILVVQQQRIGGRFGKHTLNFMGPNYRDQLVHDVPIDETPRGSCVISMDRY* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0334 792 Pfam Sodium/hydrogen exchanger family 46 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g0334 792 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 7 761 - -
Lja6g0334 792 PANTHER CATION/H + ANTIPORTER 7 761 - -
Lja6g0334 792 Gene3D - 36 439 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0334 Lja-Chr6 8581141 8584398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0334 6 748 Antiporter Super Family AT2G13620 35.316 1.08e-148 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0334 - - gmx:100779700 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0334 6 8581141 8584398 Lja6g0334 6 8581141 8584398 ECH