Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0326 ATGTCACCGTCGGCCGGAGTCCACGTCCCCCTCCTACCGGGATCCAAACCAGCGGCTCCGCCGGCGTCCGTCTCCGGCGCCGTTTTCAATGTCGCCAACAGCATCGTCGGCGCCGGAATCATGTCGATCCCGGCGCTCCTGAAGGTTCTCGGCGTGATCCCCGCTTTCGCCATGATTCTGATCGTCGCCGTGCTGGCGGAAATCTCCGTCGACTACCTCATGCGGTTCACGCATTCCGGCGAAACCAAGACCTACGCCGGCGTCATGAGGGAGGCGTTTGGGCCGCCCGGAGCTTTAGCCGCGCAAGTTTGTGTTATAATCACCAACCTTGGGGGTTTAATTCTCTACCTAATCATCATCGGGGATGTGCTATCTGGGAATCATAGCGGAGATGAAGTGCACTTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTCGCCATGTTTGTCACCTTGGTCTTGGTTATGCTTCCGTTGGTCTTGTTCCGACGTGTAGAGTCCTTGAAGTACAGCTCTGCAGTATCAACTTTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGATTGGCTATTATTGCTATGGTGCAAGGAAAAACACAGACTCCTAGATTGTTCCCTCAGTTAGACTACCAAACCTCCTTCTTTGATCTCTTCACTGCAGTTCCTGTTGTAGTCACAGCCTTCACATTTCATTTTAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGGCATCTGACATGACGCTAGCAGTTCGATTAGCATTAATGCTTTGTGCTGTTATCTACTTTGTGATTGGACTATTTGGGTACTTGTTATTTGGGGATTCAACTCAATCAGACATTCTCATCAATTTTGACCAGAGTGCTGATTCTGCAGTTGGTTCCTTTCTCAATAGCTTAATCCGTGTAAGCTATGCACTCCATATAATGCTGGTATTCCCTCTAGTGAACTTCTCCTTGAGGGCCAATCTTGATGAAATCCTATTCCCCAAGAAGCCTCTGCTAGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGTGGTGCTAGCCTTCTCCTACCTTGCTTCTATAGCAATCCCAGATATTTGGTATTTCTTTCAGTTTTTGGGTTCATCATCTGCAGTTTGCCTTGCCTTCATTTTTCCGGGCATGATTGTTTTAAGGGATGCATATTGTATATCAACAAGAAGGGACAAAATTGTAGCACTGGTTATGATAATACTAGCTGTAGTGACAAGTGTGATTGCCATTTCCACCAACATATACAATGCTTTTAGCAGCAAGTCATAA 1311 0.4722 MSPSAGVHVPLLPGSKPAAPPASVSGAVFNVANSIVGAGIMSIPALLKVLGVIPAFAMILIVAVLAEISVDYLMRFTHSGETKTYAGVMREAFGPPGALAAQVCVIITNLGGLILYLIIIGDVLSGNHSGDEVHLGILQQWFGIHWWNSREFAMFVTLVLVMLPLVLFRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTPRLFPQLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASDMTLAVRLALMLCAVIYFVIGLFGYLLFGDSTQSDILINFDQSADSAVGSFLNSLIRVSYALHIMLVFPLVNFSLRANLDEILFPKKPLLATDNKRFVILTLVVLAFSYLASIAIPDIWYFFQFLGSSSAVCLAFIFPGMIVLRDAYCISTRRDKIVALVMIILAVVTSVIAISTNIYNAFSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0326 436 Pfam Transmembrane amino acid transporter protein 22 420 IPR013057 -
Lja6g0326 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
Lja6g0326 436 Coils Coil 434 436 - -
Lja6g0326 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0326 Lja-Chr6 8189788 8192999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0326 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.199 1.23e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0326 - - gmx:100813056 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0326 6 8189788 8192999 Lja6g0326 6 8189788 8192999 ECH
Lja6g0326 6 8189788 8192999 Lja6g0326 6 8189788 8192999 PCT