Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0322 ATGGATTGTTGTGTCTGCACAACCATGCCATTGATATTAAGGCCTCCAAGGAATACAATATGCGGGTCTTGTTATGAAGGGGTTAGGAGTATAATCGATATTATGCACAATCTCGAAAGTGAGAAGGCAAAAGCAATCACCAACCCAAACGATTCTCCAGTTTCAAAGCGAAATTCTAGTAAGGCCATTGAGGATAATGCAAGACGGTGGTTTGATCATATAAACCTCTGTAATCAACAAAAAGAAGAGTTGGCTTTCCTCAGAGGCTTTGTTGCTGCATTCAAGGAACAGATTCACACTGATATACTGGTCAATCCAGGCAACAATGGTCCACCTATACCTGCACATAAATCCGTTTTGGCAGCGAGATCAGAAATTTTCAAGAACATGCTAGAATGTGACCAATGCAAAGCTTCACCTAATAATAACACCATAACAATACCCGATTTGAACCATGATGAACTAGAGTCTCTCTTGGAGTTTCTGTACAGTGGAACCATGGCTTCAGAAAAATTGGAGAAACATGTGTATGCATTGTCACAAGCAGCTGATAAGTATGATATCCCACACTTGCTCAAAAAGTGTGAGATATATCTGCTAAGTTCACTTAGCACCTCTAATGCACTTGAAACGCTAGAGATTGCTGATACTTGTTCTAACAACAAGTTGAAGGAGACAACCTTGGATTTCTTAGTTAAGAACATTGAGCATGTCGTGTCCTCCGCTAAATTTGAAGCTTTTGTACATCGGAGTCCGCAGTTAACTGTGGAGCTAGTTACTAGGGCATTTGTGAACGGTGCCAAATCATCAATATCTCCCCAAGTTTAA 828 0.4046 MDCCVCTTMPLILRPPRNTICGSCYEGVRSIIDIMHNLESEKAKAITNPNDSPVSKRNSSKAIEDNARRWFDHINLCNQQKEELAFLRGFVAAFKEQIHTDILVNPGNNGPPIPAHKSVLAARSEIFKNMLECDQCKASPNNNTITIPDLNHDELESLLEFLYSGTMASEKLEKHVYALSQAADKYDIPHLLKKCEIYLLSSLSTSNALETLEIADTCSNNKLKETTLDFLVKNIEHVVSSAKFEAFVHRSPQLTVELVTRAFVNGAKSSISPQV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0322 275 ProSiteProfiles BTB domain profile. 100 171 IPR000210 GO:0005515
Lja6g0322 275 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 269 - -
Lja6g0322 275 Gene3D - 204 274 - -
Lja6g0322 275 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 269 IPR044784 -
Lja6g0322 275 CDD BTB_POZ_ZBTB_KLHL-like 99 186 - -
Lja6g0322 275 SMART BTB_4 100 203 IPR000210 GO:0005515
Lja6g0322 275 SUPERFAMILY POZ domain 86 202 IPR011333 -
Lja6g0322 275 Gene3D Potassium Channel Kv1.1; Chain A 73 203 IPR011333 -
Lja6g0322 275 Pfam BTB/POZ domain 94 202 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lja6g0322 BTB 2.9e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0322 K10523 - gmx:100814664 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0322 6 8114298 8118293 Lja6g0322 6 8114298 8118293 ECH