Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0294 ATGGCTTCTTTAGTGGCACTGGACATTGAGAAGAACACCCAGGAGGTGAGGTCTCAGTGGGTTCTCAACGCCCCTGAGCCCCCCACTGCGTGGAACATGGTTACAGATTCTGTGAAGAAAACCATCTCACAGTTTCCACGGAAGCTTAGTTATCTCAAAGATCAACCTTGCAACACCCTCATGTCATTTTTGCAGGGGATCTTTCCTATTCTTTCTTGGGGCAGAAACTACACCGCTGCTAAATTCAGGAAAGATATTCTTGCAGGTCTCACTATTGCAAGTCTATGTATTCCCCAGAGCATTGGGTATGCGACCTTGGCACATCTTGATCCTCAATATGGCCTTTATACAAGTGTTGTGCCACCACTTATCTATGCTGTAATGGGAACATCGAGAGAGGTAGCGGTTGGTCCAGTAGCTGTGGTTTCACTGCTGTTATTCTCAATGGTTCAGAAATTAGTAGACCCTGCTGTGGATCCAGTGGCTTATACCAAGCTGGTTTTCCTCACCACTCTCTTTGCGGGAATCTTTCAGACTGCTTTCGGACTCTTCAGGTTGGGGTTCCTTGTGGATTTCCTATCCCATGCTGCAATTGTTGGATTTGTAGCTGGAGCAGCCATTGTAATTGGCCTTCAACAGTTTAAGGGACTGTTAGGCATCACTCATTTCACCACCAAAACCGACATAATCTCTGTTATGAAAGCTGTTTGGGAAGCACTTCATAATCCTTGGCAGCCTCGTAATTTTATCCTTGGAAGCTCGTTCTTGATCTTCATCCTAACGACTAGATTTCTGGGAAAAAAGAAGAAGAAGCTATTTTGGTTGGCATCAATCGCACCTCTTGTGTCCATTATACTATCAACTCTAATTGTGTTTCTGACACGAGCTGATAAAAGTGGAGTTAAAATTGTGAAACACGTCAAAGGGGGATTGAATCCAAGCTCCCTCCATGAGTTAGACTTCAACAATCCTCATGTTGGAGAAGCGGCCAAAATTGGACTTGTCGTTGCTGTTGTTGCACTTACTGAATCTATTGCCGTTGGGCGATCTTTTGCATCCATCAAAGGATACCAACTAGATGGAAACAAGGAGATGATGTCAATAGGCTTCTCAAACATCATAGGATCTCTCACCTCCTGCTATGTTGCAACTGGTTCGTTTTCCCGCACTGCTGTTAATTATGCGGCTGGGTGTGAAACTTTAATATCCAACATTGTGATGGCCATCACCGTTTTGATATCACTGCAGTTTTTTACAAAGCTCTTGTATTACACTCCAACCGCGATTATTGCTTCAGTGATTCTCTCTGCTCTACCAGGACTCATAGACATTCCAGAAGCATGCAAAATTTGGAAGGTTGATAAGCTAGACTTTCTTGCTTGCGCTGGAGCTTTCTTTGGGGTTCTCTTTGCTTCTGTGGAGATTGGTCTTCTAGCGGCGGTAATGATATCATTTTTAAAGATCATTCTCATCTCAATTCGACCTGACACAGAAGCTCTAGGTAAACTTCCTGGGACTTCTTTGTTCTGTGATGTCTATCAGTATCCTATGGCTGTTCAGATTCCAGGGGTTGTTGTAATACGTGTCAAGTCTGCGTTGCTTTGCTTTGCTAATGCCAATTTCGTTAGAGAAAGGATCATGAAATGGGTCACTCAGGAAGAGTCCAAAGATGACAAGGGAAATTCAACAAATACCATTCAACTCGTCATTCTGGAAACCTCAAATTTGGTAGACATTGACACCTCCGGAATTGCTTCCCTAGAAGAAATGCAGAAGGTGTTGATCTCAAATGGGAAACAGTTAGCCATTGCAAACCCTAGGTGGCAAGTGATTCACAAGCTAAAAGTGTCCAACTTTGTCAGCAAAATTGGAGGCAGAATATATCTGACTGTTGAAGAAGCTATTGGCTACAAGAGTGAGTTCTAA 1926 0.4341 MASLVALDIEKNTQEVRSQWVLNAPEPPTAWNMVTDSVKKTISQFPRKLSYLKDQPCNTLMSFLQGIFPILSWGRNYTAAKFRKDILAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGTSREVAVGPVAVVSLLLFSMVQKLVDPAVDPVAYTKLVFLTTLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQFKGLLGITHFTTKTDIISVMKAVWEALHNPWQPRNFILGSSFLIFILTTRFLGKKKKKLFWLASIAPLVSIILSTLIVFLTRADKSGVKIVKHVKGGLNPSSLHELDFNNPHVGEAAKIGLVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGFSNIIGSLTSCYVATGSFSRTAVNYAAGCETLISNIVMAITVLISLQFFTKLLYYTPTAIIASVILSALPGLIDIPEACKIWKVDKLDFLACAGAFFGVLFASVEIGLLAAVMISFLKIILISIRPDTEALGKLPGTSLFCDVYQYPMAVQIPGVVVIRVKSALLCFANANFVRERIMKWVTQEESKDDKGNSTNTIQLVILETSNLVDIDTSGIASLEEMQKVLISNGKQLAIANPRWQVIHKLKVSNFVSKIGGRIYLTVEEAIGYKSEF* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0294 641 ProSiteProfiles STAS domain profile. 534 638 IPR002645 -
Lja6g0294 641 PANTHER SULFATE TRANSPORTER 20 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja6g0294 641 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Lja6g0294 641 CDD STAS_SulP_like_sulfate_transporter 515 629 - -
Lja6g0294 641 SUPERFAMILY SpoIIaa-like 518 636 IPR036513 -
Lja6g0294 641 Pfam STAS domain 515 634 IPR002645 -
Lja6g0294 641 Gene3D STAS domain 494 640 IPR036513 -
Lja6g0294 641 TIGRFAM sulP: sulfate permease 69 626 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja6g0294 641 Pfam Sulfate permease family 82 462 IPR011547 GO:0016021
Lja6g0294 641 PANTHER SULFATE TRANSPORTER 2.1 20 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0294 Lja-Chr6 7315851 7332665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0294 14 635 Inorganic Solute Cotransporters AT5G10180 65.865 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0294 K17469 - gmx:100781327 1063.91