Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0279 ATGAAGTTAAGTATATTTGATTCTCTTTCTCACTCACTCTCACTCAGTGTTGGTGTCGTTTCTTCCGATCTGCTACAAAACCCAAAATCCCAAATCAACACCACCTCCATGGCAAAGAAGCAGCAGAAACGCCCTTCTCCTCTCCCAGATCCGTCTTCCTCCTCCTCCTCCGATTCAGAGGAACAACATCAACCTCCATCAGCAACCGAAGATGAAGAAGAACAACAAGTTCAAGTTTCGTCGTCTGAGGAGGAGGAGGAAGAGGAAGAACAACAACCCGAATCCGACTCTGACTCTGACTCCGACCAGCCCCCACTCTCTCATAGACCGGCAGCCAAGCGCGCTGCCGAGAACAATGCCGACGCCGAACGGGTCAATAACAAGAAGAACAAGGCAGTCGTTGACGCCGGCGGCGGAGATTCCGATGCGAAGAAGCGGTTTCTGAGAGTGTGGAGCGTGGAGGATGAGACGGCCATTCTAAAGGGCCTTGCTGAGTTCATTTCGAAAACAGGGAAGGATCCGTTGAAGCACGGTGATGCTTTTTACAATTTCATGAAGAACTCGCTTCAGTTGGATTCTAACACCAAGCATCTCATGCAGAAGGTTCGGAGGCTCAAGTACAAGTTCCACACTCATGTTGCCAAAGGCTACAACGGTGATGGCCCCAAATTCCCCAAAGTCCACTTTGACTTGTGCAAGAACATATGGGGCAGTAGTACTGAACCCAAATCCAAATCCAAATCCAAATCTAAATCCGAATCCAAATTCAAATCCACTGAAGCAGCAGAAGAAAACCCAAACACTAACGGTAATGCAGTGAACGTACCTCCTTCTTCTGCCAAGAAATCGAAATCTGACAAGCAAGTGGTGGACACTAATGTAGAGGCAAGTGTAGAGGCAAGTTTGCTTTTGAGGAGTGAAATGTTTGGTTATGGGAATATGAATGAGGATGTTGTGAAAAAGGGATTGGAGTTAATTGGAGCATCAAAGAGGGCAGAGTTGGAGGTCAGGTGGAGCAAGTTACAGGTTGCAGAGCTGGAGCTGGTTGCCAAGCGTGCTCAACTCATTTACGATCAGTCTAGAATCATTTTGGAGGCCTACAAGTCATCAAACAATTATGATTGA 1125 0.472 MKLSIFDSLSHSLSLSVGVVSSDLLQNPKSQINTTSMAKKQQKRPSPLPDPSSSSSSDSEEQHQPPSATEDEEEQQVQVSSSEEEEEEEEQQPESDSDSDSDQPPLSHRPAAKRAAENNADAERVNNKKNKAVVDAGGGDSDAKKRFLRVWSVEDETAILKGLAEFISKTGKDPLKHGDAFYNFMKNSLQLDSNTKHLMQKVRRLKYKFHTHVAKGYNGDGPKFPKVHFDLCKNIWGSSTEPKSKSKSKSKSESKFKSTEAAEENPNTNGNAVNVPPSSAKKSKSDKQVVDTNVEASVEASLLLRSEMFGYGNMNEDVVKKGLELIGASKRAELEVRWSKLQVAELELVAKRAQLIYDQSRIILEAYKSSNNYD* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0279 374 MobiDBLite consensus disorder prediction 76 97 - -
Lja6g0279 374 Pfam Protein of unknown function, DUF573 148 237 IPR007592 GO:0006355
Lja6g0279 374 Coils Coil 70 92 - -
Lja6g0279 374 MobiDBLite consensus disorder prediction 239 288 - -
Lja6g0279 374 MobiDBLite consensus disorder prediction 20 63 - -
Lja6g0279 374 Coils Coil 112 132 - -
Lja6g0279 374 MobiDBLite consensus disorder prediction 114 130 - -
Lja6g0279 374 MobiDBLite consensus disorder prediction 261 283 - -
Lja6g0279 374 PANTHER BNAANNG10740D PROTEIN-RELATED 51 370 IPR007592 GO:0006355
Lja6g0279 374 MobiDBLite consensus disorder prediction 244 260 - -
Lja6g0279 374 PANTHER STOREKEEPER PROTEIN 51 370 - -
Lja6g0279 374 MobiDBLite consensus disorder prediction 20 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0279 Lja-Chr6 6839870 6841501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0279 142 369 GeBP Transcription Factor Family AT4G25210 29.707 1.68e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lja6g0279 DUF573 3.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0279 - - lja:Lj0g3v0291669.1 193.741