Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0268 ATGTGCGGAATCCTTGCAGTGTTTGGTTGCGTCGACAACTCTCAGGCCAAACGCGCCCGCATCATCGAGTTATCTCGCAGGTTGAGGCATCGAGGTCCTGATTGGAGTGGCTTGCATTGCCATGAGGATTGTTACCTTGCTCATCAGCGTCTCGCTATTATCGACCCTACTTCAGGGGATCAACCTCTCTACAATGAGGACAAGACTGTTTTTGTCACTGTGAATGGGGAGATATACAACCATAAGGATTTGAGACAGACACTGAAGTCCCATCAACTTCGAACTGGCAGTGATTGTGAAGTGATTTCCCATCTTTATGAAGAGCATGGAGAAGACTTTATTGATATGCTGGATGGAATGTTCTCCTTCATCCTTCTTGATACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGCTGGGGCCATGATGGATCAATATGGTTTGCATCTGAAATGAAAGGTCTGAGTGATGATTGTGAAAGATTCATATCTTTTCCACCGGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCGCCATGGTTCTCAGAGCATATTCCTTCTACACCTTATGATCCAATGATTTTGCGTCAGGCCTTTGAGAGGGCTGTAGTTAAGAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTGTCTGGAGGATTGGACTCATCACTTGTTGCTGCTGTGGCCAATCGTCATTTGGCTGCATCTGAAGCTGCTTGCCAGTGGGGATCGCAGTTACATACTTTTTGCATTGGTTTAAAGGGGTCCCCGGATTTAAAAGCTGCAAAAGAGGTAGCAGATTATCTAGGTACTTGTCACCACGAACTGAATTTCACTGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATATACCATATTGAAACATATGATGTAACGACTATCAGAGCTAGTACTCCAATGTTTCTGATGTCCAGAAAAATTAAATCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAGGAATTTCACGAAGAAACGTGTCAAAAAATTAAAGGTCTTCATCTTTATGACTGCCTTAGAGCCAACAAATCAACTTCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACATAGCCATGGATATGGATCCGGAGTGGAAATTGATAAAGCCTGATATTGGAAGGATAGAAAAGTGGGTATTGCGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTATACAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGCTACAGCTGGATTGATGGCTTGAAGGATCATGCTGACAAACAAGTCACAGATTCAATGCTGAAGCATGCCAACTGTGTTTACCCTGAAAACACTCCTACTACAAAAGAGGGATATCTCTACCGGACAATTTTTGAGAAGATATATCCAAAGAATGCTGCTAGGCAAACAGTTCCAGGAGGTCCAAGTGTGGCATGCAGCACTGCAAAAGCTGTGGAATGGGATGCAACTTGGTCCAAAAATCCTGACCCTTCTGGTCGTGCAGCGCTGGGTGTTCATGCAGCTGCGTATGCAGATGCACCATAA 1677 0.4323 MCGILAVFGCVDNSQAKRARIIELSRRLRHRGPDWSGLHCHEDCYLAHQRLAIIDPTSGDQPLYNEDKTVFVTVNGEIYNHKDLRQTLKSHQLRTGSDCEVISHLYEEHGEDFIDMLDGMFSFILLDTRDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKGLSDDCERFISFPPGHIYSSKQGGLRRWYNPPWFSEHIPSTPYDPMILRQAFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRHLAASEAACQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTCHHELNFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHEETCQKIKGLHLYDCLRANKSTSAWGVEARVPFLDKEFINIAMDMDPEWKLIKPDIGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHADKQVTDSMLKHANCVYPENTPTTKEGYLYRTIFEKIYPKNAARQTVPGGPSVACSTAKAVEWDATWSKNPDPSGRAALGVHAAAYADAP* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0268 558 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Lja6g0268 558 PIRSF Asn_synthetase_glu-h 357 516 IPR006426 GO:0004066|GO:0006529
Lja6g0268 558 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 199 482 - -
Lja6g0268 558 Gene3D HUPs 195 514 IPR014729 -
Lja6g0268 558 PANTHER ASPARAGINE SYNTHETASE 1 556 - -
Lja6g0268 558 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Lja6g0268 558 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Lja6g0268 558 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Lja6g0268 558 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Lja6g0268 558 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 367 IPR006426 GO:0004066|GO:0006529
Lja6g0268 558 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Lja6g0268 558 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Lja6g0268 558 CDD AsnB 2 192 IPR033738 -
Lja6g0268 558 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0268 Lja-Chr6 6598411 6604357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0268 69 164 PRT Gene Family AT2G16570 33.019 1.57e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0268 K01953 - tcc:18611569 1054.66