Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0216 ATGGGAGTGTTCACATTTGTTCTCCGCAAATCCGGCAAGGAATGGAAGGCTAAGCAGTTTTCCGGCGACATTCAGGAATCGTCTCCGTCGACCTTCGAGATCCAAAGGAAGCTCGTTAAGGCTGTTCAAGCCACAGATTCCTCCGGTGCAGTTCGGACCTCTTACTCTCTTGTTTCCCCTTCATCTGCCGTTTTTCAGGTCATTGTGGGTGGAGCAGTCATTATTGGAGGTGGTGTAGCTGCTGCTCCTGCAGGAGGTGCTGCCCCAGCCAGTAACGCTGCCCCCGCTGCAGCGAAGAAAGAAGAAAAAGTTGAGGAAGAAGAGGAGGATGATGATTTGGGGTTGTCACTCTTTGACTAG 360 0.5167 MGVFTFVLRKSGKEWKAKQFSGDIQESSPSTFEIQRKLVKAVQATDSSGAVRTSYSLVSPSSAVFQVIVGGAVIIGGGVAAAPAGGAAPASNAAPAAAKKEEKVEEEEEDDDLGLSLFD* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0216 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 - -
Lja6g0216 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
Lja6g0216 119 MobiDBLite consensus disorder prediction 83 119 - -
Lja6g0216 119 MobiDBLite consensus disorder prediction 104 119 - -
Lja6g0216 119 Pfam 60s Acidic ribosomal protein 37 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0216 Lja-Chr6 4328173 4329676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0216 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 59.420 7.15e-24 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0216 K02942 - zju:107420942 98.5969