Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja6g0200 | ATGGCACTTAGAAAAAGAAATTTGCACCAAGTGAAGCATCCATTCAATGCTTATGCATTTGAGGCTTTTGTGTTTGGCTCATGGAAACCCGTGAAGTTCATTAAAATTGAATCAGGAAGGGTGACCTTTCATTTTGTGGATAATCATGAGATATACATAGAGAAAGGTTTTTCGGACTTGCGAACAAGGTCAACGATAGCTACTTTTGCAGACATGCGAATAAGGTCAAGGAAAGCTACTGTATCTGATTGCCTATCCTTCTTGCGGTGTGGGATTAATGTGTGTGTGTTATCAACCTTTCAAAGCAGTGATGATTCGAATCAATCAAACTCTATTCCGGTGTGGGCTGATGCTAAAATAGTTTCCATTGAGAGAAAGCCCCACAACCCTGAATGCTCATGTGAGTATCATGTAATCTTTTATACAAATCAAGGTTCCCTTGGTTCAAATCAAAATACTCTGAGTAAGGATTTCAAAGTTATTGGGTTAAATCAAATTTCTATCCTTCAAAGGCTTGGATGTAAAAGCCTTGAAGATCAACCATTTCGGTGGGACTCATCAGAAAACTGCACCAAGAGACCACAAACGAGGTTGTCCTTAAGAAAGTTTGTCTGCGACATTTCATTGCTAGCTGCTTTATCACTTGTGAAGAACATGTCCTTCTGTGTGAGATCAGAGCAAAATAAGATTCTCTACCAAATCATGGAAAAGGATACTACTAACTCTGATTTTCACATCAAATCTATGAACTTCAAACTAAAAGGTGGCAAATCACTGCCCTCTATTTTTGAACTTGCCACATGGAGAATTGTCCCTGCTATGCAAAATAATGAAGTACAAGTGTTACCACCATTACGACGTTCGACACGTCGAATCAAGAATCCTGAATTTTACTTGGGCTATTGTGATGTTGGTTCAAGTTCTGTAATTCAAACTCGGAAATATAAGGTGGACACGAGCAAAAATGATGACAAGTTGGCACTAGTGAATTACACTACTGAAGGGGGTGTTGGAACTAGTGTTCAAAAGGGTTGTGATGCTGATGCCATTGAAAACGAACATATAGAACCAATTTCTACTGTTCTAGCTCCTAAGAAAGGTGGTTTAGATGCTCTTGAACCTCGCATTCTCCATGAAAGTGGTCAATTTTCTTCCCAATTTGTCGATATTTGGGGATCAAACAACAATGATGATACCGGTATGTGTATAAATCAGCCTAGTGGTGATACAAAAGTAGTTGGTGAAACCTCTTCAAGACATTATTATAATCTCAGAAGCGGTAAGAAGTATCAGAGGAAGGATTCATCAAATTCAGATGATATGATGGAAGATCTGGAACCCAAATGGGAGGGGTTGAATTCTAAAATAGGAGCTGAGCGCAAGAGGCGACATGGTTCAGGTTTTTCAAGAAATAGAAATGATGATGACGATGATGGTGGCAATGAAGAACGAGCTCGGAGACGTAGGGCCTTAAATGTAGATGCATCAAAGGAAATGATAGATTCTTACTTGAAGGATATTGATAAATTACCCACAATAGAAGAGGCTCCTATTAATGAGCAATGGAATGAAGCAATCAATTTTGGCAAAGACAAGGAAACTGAGAAAATTCAAAGAGAGGAGCAGGAAGTTTCTGAAATCGATATGTTATGGAGAGAAATGGATGATGCAATGATAGAGAGTTTTCTTCAAGAACAAACAGAGCAGGGTTCAAGTGCTCCAACTAAGGAAGAGACTACTAGATCTTGTGAGCACGATTATAGATTGGATGAGCAACTTGGAATTTATTGCCATAGATGTGGCATTGTGAAGGAAGAAATAAGATATATCATGCCAGGCTTTGCTGATTATGAACCAAAGCCTGATGATCAACAAAAGGTTGATGATGAGCCGAAGGGCGGAGATAATGATATCCCTTTGCTTCCTATATCTGCTGCTTGTGATGAGCTGAAGGGTGAAGATAATGATAATGATATCCCTTTGCTTCCTATATCTGCTGCTTTTGGTGAGCCTATATCCATTGAAAATGACAGCGTTTGGGGATACATTCCTGAACTTGGAGAAAAAATGCTCCTCCACCAAAAGAAAGCTTTTGAGTTTCTTTGGCAAAACATTGTGGGGTCCATAAACCCAACACTTATGGAAGCACAACATGAAAACAGAGGAGGTTGTGTGATATCTCATGCTCCTGGAGCTGGAAAAACATTCCTAACAATTGCGTTTCTTGTTAGCTATTTGAAGTTATTCCCAAACAAAAAACCCTTAATCCTTGCTCCAAAAACCACACTTTACACTTGGTACCAAGAGTTTATCAAGTGGAAGATTCCAATGCCAGTTTACTTGATTCACAGTCGCAGAAGCCAGAGAAATTTTAGTGGAAATGCATTGTCTCTTCCTGGAATTCCAAATCCCAATGAAGATGTCAAGCATACTTTGGATTGCTTGGAAAAGATTCAAAAGTGGCTTGCACACCCAAGTGTTCTAGTCATGGGTTACACTTCATTTTTATCATTAATGCATGAAAATTCAAAGTATGAACACAAAAAGTTCATGGCTAAAGCATTGAGGGAAAGTCCTGGGATTCTTGTGTTGGATGAAGGGCACAATCCAAGAAGCACCAAATCAAGTTTGAGGAAATGGTTGATGAAAGTGAAGACAGAACTGAGAGTACTCCTCTCTGGCACATTGTTTCAGAACAATTTTTGCGAGTATTTTAATACACTTTGCTTAGCAAGACCAAGGTTTGTTCATGAAGTGCTGCAAGAGTTAGATCCAAAATATGTGAAGAGCGAAGCTGAAAACAAAGCTCCCCATTTAGTCGAGTCACGGGCAAGGAAATTCTTCATTGATAAAATTGGGGTGAAAATAGACGCTGGTAATGACAATGTTGAGGAGAAGATGCAGGGTCTGAACTTGTTGAAGAAAATCACAAGTGGTTTCATAGATGTTTATGATAGTGTGAATGCAGATAGTTTACTACCTGGTTTACAAATTTACACCTTGTTGATGAATAACACTGAGAAGCAGAGTGAGATCTTGCAGAAACTGCAGAAGAAAATGAACCGGAGTGGCGGGTACCCTCTTGAGGTAGAGTTTTTGATAACCCTTGTGTCAATACATCCATGGCTTATCTCAACAACAAAATGTGCCAAAAAGTTTTTCTCTTCAAGCCAATTGAAGCAACTAGAAAAATGCAAGTTTGATTTGAAAATAGGGTCAAAGGTGAAATTTGTTTTGAGCCTTGTCTTCCGTGTGGTCAAGATGAAGGAGAAGGTTCTTATCTTTTGTCGCAACCTTGCACCAATGTGGCTGCTTCTGGAGTTGTTTGAGAGGTTCTTCCATTGGAAAGCAGGAACAGAAATCTTGACACTACATGGGGAACAAGAGTTGTTTGAGCGCGGAAAAGTGATAGATAAGTTTGAGGATCGTTGTGGAGCTTCAAAGGTTCTCCTTGCTTCAATCAGCGCTTGTGCGGAAGGGGTTAGTTTGACAGCAGCTTCTCGAGTGATTTTCTTGGACTCTGAGTGGAATCCGTCTAAAACAAAGCAGGCTATTGCACGGGCCTTCCGTCCTGGCCAAGACAAGGTCGTTTATGTTTATCAACTATTAGCAGCTGGATCATTTGAGGAGGATAAATATAGGAAAACCAACTGGAAAGACTGGGTTTCTAGGATGATTTTCAGTGAGGACTTTGTGGAGGACCCTTCCAAATGGCAGGCAAAGAAAATTGAAGATGATGTGCTAAGAGAAATGGCTAAGCTGGATAAGACTAAATCAATCCACCAAATTGTGAAGAATGAGAAGGCTTCAACAAACCTATGA | 3822 | 0.3972 | MALRKRNLHQVKHPFNAYAFEAFVFGSWKPVKFIKIESGRVTFHFVDNHEIYIEKGFSDLRTRSTIATFADMRIRSRKATVSDCLSFLRCGINVCVLSTFQSSDDSNQSNSIPVWADAKIVSIERKPHNPECSCEYHVIFYTNQGSLGSNQNTLSKDFKVIGLNQISILQRLGCKSLEDQPFRWDSSENCTKRPQTRLSLRKFVCDISLLAALSLVKNMSFCVRSEQNKILYQIMEKDTTNSDFHIKSMNFKLKGGKSLPSIFELATWRIVPAMQNNEVQVLPPLRRSTRRIKNPEFYLGYCDVGSSSVIQTRKYKVDTSKNDDKLALVNYTTEGGVGTSVQKGCDADAIENEHIEPISTVLAPKKGGLDALEPRILHESGQFSSQFVDIWGSNNNDDTGMCINQPSGDTKVVGETSSRHYYNLRSGKKYQRKDSSNSDDMMEDLEPKWEGLNSKIGAERKRRHGSGFSRNRNDDDDDGGNEERARRRRALNVDASKEMIDSYLKDIDKLPTIEEAPINEQWNEAINFGKDKETEKIQREEQEVSEIDMLWREMDDAMIESFLQEQTEQGSSAPTKEETTRSCEHDYRLDEQLGIYCHRCGIVKEEIRYIMPGFADYEPKPDDQQKVDDEPKGGDNDIPLLPISAACDELKGEDNDNDIPLLPISAAFGEPISIENDSVWGYIPELGEKMLLHQKKAFEFLWQNIVGSINPTLMEAQHENRGGCVISHAPGAGKTFLTIAFLVSYLKLFPNKKPLILAPKTTLYTWYQEFIKWKIPMPVYLIHSRRSQRNFSGNALSLPGIPNPNEDVKHTLDCLEKIQKWLAHPSVLVMGYTSFLSLMHENSKYEHKKFMAKALRESPGILVLDEGHNPRSTKSSLRKWLMKVKTELRVLLSGTLFQNNFCEYFNTLCLARPRFVHEVLQELDPKYVKSEAENKAPHLVESRARKFFIDKIGVKIDAGNDNVEEKMQGLNLLKKITSGFIDVYDSVNADSLLPGLQIYTLLMNNTEKQSEILQKLQKKMNRSGGYPLEVEFLITLVSIHPWLISTTKCAKKFFSSSQLKQLEKCKFDLKIGSKVKFVLSLVFRVVKMKEKVLIFCRNLAPMWLLLELFERFFHWKAGTEILTLHGEQELFERGKVIDKFEDRCGASKVLLASISACAEGVSLTAASRVIFLDSEWNPSKTKQAIARAFRPGQDKVVYVYQLLAAGSFEEDKYRKTNWKDWVSRMIFSEDFVEDPSKWQAKKIEDDVLREMAKLDKTKSIHQIVKNEKASTNL* | 1274 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja6g0200 | 1273 | MobiDBLite | consensus disorder prediction | 619 | 635 | - | - | |
| Lja6g0200 | 1273 | MobiDBLite | consensus disorder prediction | 448 | 490 | - | - | |
| Lja6g0200 | 1273 | Pfam | Helicase conserved C-terminal domain | 1075 | 1191 | IPR001650 | - | |
| Lja6g0200 | 1273 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 859 | 1230 | IPR027417 | - | |
| Lja6g0200 | 1273 | MobiDBLite | consensus disorder prediction | 615 | 638 | - | - | |
| Lja6g0200 | 1273 | CDD | SF2_C_SNF | 1066 | 1203 | - | - | |
| Lja6g0200 | 1273 | SMART | ultradead3 | 686 | 922 | IPR014001 | - | |
| Lja6g0200 | 1273 | Pfam | SNF2-related domain | 696 | 918 | IPR000330 | GO:0005524|GO:0140658 | |
| Lja6g0200 | 1273 | Gene3D | - | 674 | 948 | IPR038718 | - | |
| Lja6g0200 | 1273 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 715 | 914 | IPR014001 | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information