Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0199 ATGAATAACTCTGTTTCAGATCAAGGTTTCTTCATTGAAAGCGATGATGAAGATACGGATAAGGAGATGAGCAAAGAAGAAAATGATGGAAATGCTTCAGATTATTTCCATGACTCCAATGACAACCTGGTTCAGAGGAAACCCAGTTCTTACAGCATAGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGCGTGCCATCACCAAACATAGGATTTTTGGGCACCCCATCATTGTCGAATTTAAGCAGTTCTTTTCTTTCTTCATCCTTAACAAGGAGGCACACTCAAGACTTCTTGCCATCACAACAGAAGCCTCTGTTACCACCGACGGCGGTAGAGGAGCAATATCGACGTAGCTCTCAGGCGTTGCTCCCTCCCCTTCCATCTAGGAAGCCTTCCATTAGGAAGGATGTTTCCAAGGTTTCTCATGAAGTTCAAATTCCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGAATAGGAATCCTTTCAACCCCTTATGCCCTTAGAGAAGGTGGATGGGCTTCACTTTCAATCTTGTTAGTATTTGCTGTTTTCTCATTTTATACCGGGTTGCTCTTGCGGCATTGTTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTACTACTGGGCGTGTTATCATCTCAATAATATTGTACATGGAATTATATGCTTGTTGCATTGAATACATAATCGTAGAGAGCGACAACTTGTCTACATTATTTCCTGATGCACACTTAAGTATTGGTGGAATTGAGCTGAATGCACACATTCTGTTTGCAATCTTGACCACCTTGGCTCTTCTGCCCACTGTTTGGCTCCGTGACATGCGTATACTGAGTTACATCTCAGCTTGTGGAGTTATTGCAACGATTTTAGTGGTTCTTTCCTTGTTCTGGGTTGGCTTGCTAGACAACGTTGACTTCGATCCCAAAGGAACAACAACACTCAATATTGCAACTTTTCCGGTTGCCATTGGTCTATATGGTTACTGTTATGCAGGACATGCTGTATTCCCAAACCTCTACACAGCCATGGCAAATCGAAACCAATTCCCTGCAGTCCTCTTGACATGTTTTGCTATTTGTTCAACTATGTATTGTGCTGTAGCTGTTATGGGATACGGCATGTTTGGAGAATCAACACTCTCTCAGTTTACTCTTAATATGCCCCGAAACTTGGTAGCCTCAAAGATTGCTGTGTGGACTACGGTGATTAATCCATTTACCAAATATGCTTTGAGTCTATCTCCAGTTGCAATGTGTCTTGAGGAGCTGATACCATCAAACCATTCCAAATTTAACTTATATTCCATGGGCATCAGAACAGTTCTTGTAGTTTCTACACTACTTGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTGATGTCCTTGATTGGATCTTTACTCACAATGTTTGTTTCTTTGATTCTTCCCGCTGCTTGTTTCCTAAGCATAAGGGGTGGCAAAATCTCGCGCTTTCAGGTAGCACTTTGTACTACAATTATTATAGTAGGTACTGTATGTTGTGGTTTGGGATCATACTCAGCCATCTCGGAGATTATTAAGCAGTTGTTTGGATGA 1641 0.4211 MNNSVSDQGFFIESDDEDTDKEMSKEENDGNASDYFHDSNDNLVQRKPSSYSIAWPQSYRQSIDLYGSVPSPNIGFLGTPSLSNLSSSFLSSSLTRRHTQDFLPSQQKPLLPPTAVEEQYRRSSQALLPPLPSRKPSIRKDVSKVSHEVQIPGQCTFGQAVLNGINALCGIGILSTPYALREGGWASLSILLVFAVFSFYTGLLLRHCLDSEPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIIVESDNLSTLFPDAHLSIGGIELNAHILFAILTTLALLPTVWLRDMRILSYISACGVIATILVVLSLFWVGLLDNVDFDPKGTTTLNIATFPVAIGLYGYCYAGHAVFPNLYTAMANRNQFPAVLLTCFAICSTMYCAVAVMGYGMFGESTLSQFTLNMPRNLVASKIAVWTTVINPFTKYALSLSPVAMCLEELIPSNHSKFNLYSMGIRTVLVVSTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPAACFLSIRGGKISRFQVALCTTIIIVGTVCCGLGSYSAISEIIKQLFG* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0199 546 MobiDBLite consensus disorder prediction 1 43 - -
Lja6g0199 546 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 27 543 - -
Lja6g0199 546 Pfam Transmembrane amino acid transporter protein 155 533 IPR013057 -
Lja6g0199 546 PANTHER OS05G0424000 PROTEIN-RELATED 27 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0199 Lja-Chr6 3862742 3872021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0199 1 479 Amino Acid or Auxin Permease AAAP Family AT2G39130 66.392 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0199 K15015 - gmx:100781123 831.247