Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0195 ATGGCCGCCGCAGCACCGCCACCCGCACCAACTCCGGCAGCCACATCATTGCCGGAAACCGCCACACACCGTCACCCTGTGTTCACCCGCATCCGCCTCGCCGTCCCTTCCGACGTCCCCCACATCCACAAGATGACATACCAAATGGCCGTCTTCGAACGCCTCACCCACCTCTTCGCCACCACCGAATCCTCCCTCACCTCCACGCTCTTCTCTCCGGACAACAAACCCTTCCACTCCTTCACCGTCTTCATCCTCGAAGTCTCCTCGAACCCCTTCACCGACACCCACTTCGACAACGACCCTTTCTACAAGCCCGTAACGAAAACCGTGCACTTGGAGCTCCCACTCGATGACCCAGAGAAGGAAACGTTCAGAAATCAGCTCGGGAATGAGGTTTTCGTTGCTGGGTTTGTGCTGTTTTCCCCAAACTATTCCACTTTTCTGGCGAAGCCTGGGTTCTATGTGGAGGATCTGTTCGTGAGGGAGTGTTATAGGAGGAAGGGGTTTGGGAGAATGCTTCTTTCTGCGGTGGCGAAACAGGCTGTGAAGATGGGGTATGGGAGAGTGGAGTGGGTTGTGCTTGATTGGAATGTTAATGCTATCAGGTTTTATGAGGATATGGGTGCTAAAATCTTGCAGGAATGGAGGCTTTGCAGGCTCACTGGTGATGATTTGCAGGCTTATGGAGGTTCTGAGTGA 702 0.5427 MAAAAPPPAPTPAATSLPETATHRHPVFTRIRLAVPSDVPHIHKMTYQMAVFERLTHLFATTESSLTSTLFSPDNKPFHSFTVFILEVSSNPFTDTHFDNDPFYKPVTKTVHLELPLDDPEKETFRNQLGNEVFVAGFVLFSPNYSTFLAKPGFYVEDLFVRECYRRKGFGRMLLSAVAKQAVKMGYGRVEWVVLDWNVNAIRFYEDMGAKILQEWRLCRLTGDDLQAYGGSE* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0195 233 PANTHER ACETYLTRANSFERASE NATA1-LIKE-RELATED 25 232 IPR039534 GO:0016747
Lja6g0195 233 PANTHER DIAMINE N-ACETYLTRANSFERASE 25 232 - -
Lja6g0195 233 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 83 224 IPR000182 GO:0016407
Lja6g0195 233 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 30 225 IPR016181 -
Lja6g0195 233 MobiDBLite consensus disorder prediction 1 21 - -
Lja6g0195 233 CDD NAT_SF 135 191 - -
Lja6g0195 233 Pfam Acetyltransferase (GNAT) family 129 209 IPR000182 GO:0016407
Lja6g0195 233 Gene3D - 29 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0195 Lja-Chr6 3837541 3838647 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja6g0195 Acetyltransf_1 1.9e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0195 K22883 - jre:108997151 318.546