Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0192 ATGGGATTCTCTTTGTCATCAACAGCAGCAAGTACTTGCATTTTGTTCTTGTTCCTACTCTCTTGCACTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGATCCTAATGGGAATATCACAATCAAATGGGATATTATAACCTGGACATCAGATGGTTATGTTGCGGTTGTTACAATGAACAACTTCCAACAATATCGTCATATCGCTGCACCTGGCTGGTCATTAGGATGGACATGGGCCAAAAAGGAGGTAATATGGAGCATGGTGGGGGGGCAGGCCACTGAACAAGGGGATTGTTCAAAATTTAAGGGATCGATTCCACATTGCTGTAAAAAGGACCCCACAGTAGTAGATTTACTTCCCGGAACACCTTACAATATGCAATTCTCAAATTGCTGCAAAGGTGGGGTACTTAGTTCATGGGCACAAGATCCAACCAATGCAGTAGCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACAACAAATAAAACTGTCAAAGTCCCCAAAAACTTCACTTTGAAAGCACCAGGACCAGGTTATACATGTGGGCCAGCAAAAATTGTGAAACCCACTAAATTCATTCAACCAGATAAAAGGAGGGTGACTCAAGCACTCATGACATGGAATGTGACATGCACGTATTCACAATTTCTAGCTCAGAAAACTCCCACTTGCTGTGTCTCCCTCTCATCTTTTTATAATGATACCATCGTACCCTGCCCAACATGTGCTTGTGGTTGCCAGAGTAACTCATCTCGATCAGGGAGCTGTATAGAGGCAGATACACCACATTTAGCATCGGTTGTTGCCGGTTCTGGAAAGAATACACCTTTGGTTCAATGCACTAGGCATATGTGCCCCGTCCGAATACATTGGCATGTTAAGCTTAACTACAAAGAGTACTGGCGTGTGAAGGTCACTATTACTAATTTTAATTACAAAATGAACTATTCTGAGTGGAACTTGGTTGCTCAACACCCGAACTTCGACAATCTAACTCAGTTATTCAGTTTCAACTACAAGTCATTAACTCCTTATGGTTCAATAAATGATACAGCATTGCTTTGGGGAGTGAAGTTCTATAATGATTTTCTCAATGAAGCTGGCCCTAGTGGTAATGTTCAGTCAGAGCTACTCTTCCGAAAGGACAAATCAACTTTTACTTTTGAGAAGGGCTGGGCTTTTCCTCGGAGGATCTACTTCAATGGTGACAACTGTGTTATGCCCTCGCCTGATGCTTATCCATGGTTACCTAATGCTGGTTCTCGGCAAGAGGTTTCTTTGTTTGCTTTAGTGATGGCCTCTTTGGTAGCTGTGGTATTATGTTTCGCACAGGCATAA 1347 0.4246 MGFSLSSTAASTCILFLFLLSCTCFTSTDAYDPLDPNGNITIKWDIITWTSDGYVAVVTMNNFQQYRHIAAPGWSLGWTWAKKEVIWSMVGGQATEQGDCSKFKGSIPHCCKKDPTVVDLLPGTPYNMQFSNCCKGGVLSSWAQDPTNAVASFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVKPTKFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSRSGSCIEADTPHLASVVAGSGKNTPLVQCTRHMCPVRIHWHVKLNYKEYWRVKVTITNFNYKMNYSEWNLVAQHPNFDNLTQLFSFNYKSLTPYGSINDTALLWGVKFYNDFLNEAGPSGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPSPDAYPWLPNAGSRQEVSLFALVMASLVAVVLCFAQA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0192 448 PANTHER COBRA-LIKE PROTEIN 9 444 - -
Lja6g0192 448 Pfam COBRA-like protein 54 217 IPR006918 GO:0010215|GO:0031225
Lja6g0192 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0031225
Lja6g0192 448 PANTHER PROTEIN COBRA 9 444 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0192 Lja-Chr6 3685040 3688489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0192 1 443 COBRA Gene Family AT3G02210 74.165 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0192 - - gmx:100783820 852.432