Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0191 ATGAGGCTTGTCATTGCAGCTCTTTGCGTTATTGTGCTATTTTCTTATGGAGATGTTGTGTATTGGACACCAGATGGTTGTGGTAATGCAACAATTCATGTAATGAAATCACCTGTTTCTGTCAACCAGGCAGTGGTAACAATGAGTAATTTCCAAAAGTTCAGACACATCATGAACCCTGAATGGACATTGGGATCGTCATGGGCTAAGAAAGATGTTATATGGTCCATGGTAAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCAAACTGCTGCAAGGGTGGAGTGGTTGCAGCATGGGGCCAAGACCCTTCAGCAGCTGTCTCATCCTTCCAAATCAGTGTGGGGCAAGCTGGTACTTCAAACAAGACAGTTAAACTCCCCAAGAACTTCACACTCTCAGCTCCAGGACCAGGCTACACTTGTGGCTCTGCCAAGATTGTTCCTTCAACCACTTTCCTCACAGCCGACAAGCGCCACAAGACTCAAGCACTTATGATCGACATGAACGTTACCTGCACATATTCTCAATTTCTGGCAAGAAAGAACCCAAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAGACCATTACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCAGAACAAGAAGAACTGTGTCAAGAATGAATCTAAATTTCTCAGCAAGGCTGGGGTTCACACTCCAAAGAAAGACAGTGACCCACTGCTGCAGTGCACTCATCATATGTGCCCTATCAGGGTACATTGGCATGTGAAGGTCAACTACAAAGACTATTGGCGAGTCAAGATCGTTGTAACAAATTTCAATTATAGGATGAATAACTCTCTCTGGACTCTTGCAGTTCAGCATCCAAATCTTAAACATGTAACTCAAGTTTTCAGCTTTGATTACAAGTCTTTGCTTCCTTATGAGTCCATAAGTGATACTGGTATGTTCTTTGGCATGAAATACTTTAATGATCTCTTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACATGGATACGTTCACACTCAAGCAGGGGTGGGCATTTCCTTGCAAGATCTACTTTAATGGCGAAGAATGCATGAAGCCGTCACCTGACACCTACCCATTCCTCCCTAATTCTGCCTCTGTAAATGTTCTAAACTTCCCAGGATTCATTTTCTCATTTGTGCTGCTAGCTGCTTGGTGA 1227 0.4385 MRLVIAALCVIVLFSYGDVVYWTPDGCGNATIHVMKSPVSVNQAVVTMSNFQKFRHIMNPEWTLGSSWAKKDVIWSMVKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAVSSFQISVGQAGTSNKTVKLPKNFTLSAPGPGYTCGSAKIVPSTTFLTADKRHKTQALMIDMNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKNESKFLSKAGVHTPKKDSDPLLQCTHHMCPIRVHWHVKVNYKDYWRVKIVVTNFNYRMNNSLWTLAVQHPNLKHVTQVFSFDYKSLLPYESISDTGMFFGMKYFNDLLMEAGPSGNVQSEVLLQKDMDTFTLKQGWAFPCKIYFNGEECMKPSPDTYPFLPNSASVNVLNFPGFIFSFVLLAAW* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0191 408 PANTHER COBRA-LIKE PROTEIN 4 78 - -
Lja6g0191 408 PIRSF COBRA 1 80 IPR006918 GO:0010215|GO:0031225
Lja6g0191 408 PIRSF COBRA 78 407 IPR006918 GO:0010215|GO:0031225
Lja6g0191 408 PANTHER PROTEIN COBRA 79 405 IPR006918 GO:0010215|GO:0031225
Lja6g0191 408 Pfam COBRA-like protein 79 184 IPR006918 GO:0010215|GO:0031225
Lja6g0191 408 Pfam COBRA-like protein 43 78 IPR006918 GO:0010215|GO:0031225
Lja6g0191 408 PANTHER PROTEIN COBRA 4 78 IPR006918 GO:0010215|GO:0031225
Lja6g0191 408 PANTHER COBRA-LIKE PROTEIN 79 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0191 Lja-Chr6 3681593 3684811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0191 18 395 COBRA Gene Family AT5G60920 58.128 2.70e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0191 - - gmx:100783410 665.611