Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0185 ATGGAACCTCCTACACAGAATACACAGCCCACCCCTCTAAGGAAGGTGATTGTTGTGGCATCCATCGCGGCTGGGATACAATTCGGTTGGGCGCTCCAGCTTTCCCTCCTCATGCCTTACATCAAGCTTCTAGGCGTTACACACAAGTCTGCCCCTCTTGTCTGGCTCGGTGGACCCATATCTGGGGTGTTCGTCCAGCCCATTGTGGGCTACTACAGCGACCGTTGCACCTCCCGCTTTGGCCGTCGCCGCCCATTTATCTTCGCTGGCACAATTGCGGTCGTTGTCGCGGTCTTACTCATCGGCTATGCCGTGGACCTTGGGCATGCATTTGGGGACGACCTCTCAAAGAAAACTCGCCCCGGCGCCATCACCATCTTTGTAGTCGGATTTTGGGTACTCGATGTCGGCAACAACATGCTTCAAGGCCCCTGTCGTGCCTTCCTCGGCGATCTTTCCACTGGTCAGACGAGCAGTTTTCGTACCGGCTACACCCTCTATTCATTTTTCATGGGCCTTGGTAATCTGCTGGGATTTGCGGCAGGTGCATACGGCAGGCTCCACAATATCGTTCCCTTCACAAAGACGAAGGCATGTGACGCGTTATGTGCTAACCTGAAAACATCCTTCTTCATAACGATCATCCTTCTGCTCCTTGTTGTCATCTTCGCACTCGTTTATGTGCGCGACCCTCCAATCGGGCCTGTTCAAGAGACCGGCCACAATGTGAGTAATCAGTGGTTCGTAGGGCTCATCGGCGCCATTAAAGAGTTGAAGAAGCCAATATGGATGTTGATGCTGGTGACCGCCATCAACTGGATTGCTTGGTTCCCTTTCGTCATCTACGACACTGATTGGATGGTGCGAGAGGTGTATGGTGGGGATGCAGGGACGGTAGCGTACGATGCTGGGGTTCATGCTGCCACATTAGGGCTGATGCTGAATTCGATGGTGGTGGCTTTGACTTCACTAGTTGTGGAGCGGGTGAGCCACGTTTGCCTCACCATGACAGTGCTCATTGCCAAGGTGGCAGAGCATGAACGCCAGGTGAGCAGCGGCGCCACCGTCGGGAATCCATCCACTGGAGTGAAGGCCAGTGCCATGATCCTCTTCTCCGTCCTCGGAATCCCTCTTGCGATTACTTATAGCATCCCATTTGCGCTTGGATCGATATACTCAACCAGTACAGGGGGAGGACAAGGTTTATATTTTGGAGTTCACAATATTGCAATGGTCATTCCACAGATAATTATATGGGGATTAAGTGGACCATGTGATGCTTTATTTGGTGGTGGTAACTTGCCGGCGTTTTTGGTGGGTGCCATAATGGCCGTTGTTAGTGCCATATTGGCAATAGTTTTGCTGCCTTCTCCAGCGCCAGCTGATCATACGGCAAATGCTTGA 1404 0.5235 MEPPTQNTQPTPLRKVIVVASIAAGIQFGWALQLSLLMPYIKLLGVTHKSAPLVWLGGPISGVFVQPIVGYYSDRCTSRFGRRRPFIFAGTIAVVVAVLLIGYAVDLGHAFGDDLSKKTRPGAITIFVVGFWVLDVGNNMLQGPCRAFLGDLSTGQTSSFRTGYTLYSFFMGLGNLLGFAAGAYGRLHNIVPFTKTKACDALCANLKTSFFITIILLLLVVIFALVYVRDPPIGPVQETGHNVSNQWFVGLIGAIKELKKPIWMLMLVTAINWIAWFPFVIYDTDWMVREVYGGDAGTVAYDAGVHAATLGLMLNSMVVALTSLVVERVSHVCLTMTVLIAKVAEHERQVSSGATVGNPSTGVKASAMILFSVLGIPLAITYSIPFALGSIYSTSTGGGQGLYFGVHNIAMVIPQIIIWGLSGPCDALFGGGNLPAFLVGAIMAVVSAILAIVLLPSPAPADHTANA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0185 467 CDD MFS_SLC45_SUC 17 452 - -
Lja6g0185 467 Gene3D MFS general substrate transporter like domains 13 234 IPR036259 -
Lja6g0185 467 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 6 461 - -
Lja6g0185 467 SUPERFAMILY MFS general substrate transporter 14 459 IPR036259 -
Lja6g0185 467 TIGRFAM GPH_sucrose: sucrose/H+ symporter 12 459 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lja6g0185 467 PANTHER SUGAR TRANSPORTER 6 461 - -
Lja6g0185 467 Pfam Major Facilitator Superfamily 28 331 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0185 Lja-Chr6 3498293 3501498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0185 4 460 Sucrose Transporter Gene Family AT1G71890 56.549 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0185 K15378 - gmx:100782007 556.984