Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0171 ATGGCTAATGAAATCGTTGATCCTACAAACTCACCTCCATCACCACCCAGAACATCATCTAATGCACCAATAATCTTTCTCAATTTTGGTGATTCTTCTTCAACAAATGTTCAACTACAAAGTTCTCCCATGCCTTTATGGTCTAATATGAACCTTACATACTATCGTCAAAATGCTTTATGGCCAGCTTCATCTCACATCTATGAGCCTTTTCACTTTCCTTTCAGTTTCCAGCCTAGCATGGACGGCAATCGAGTTTTCACAGTTCTCGAACCAGTCCCTGAAGCAAAATCATTCCTCTTTCCTCATGGAGTTAGGTTCAAGGAGCCTTGGACCGAGAGAGAGCATGAGTTATTTTTGATGGGGCTAATCAAGTTTGGAAAAGGGCACTGGAGCGAAATCGCTAAATACTTTTTGTTGAACAAGACTCCACAACAAGTTCAAAATTACGCTGCTAGCTTTTACAGGCACCTACCAGCCACATACTTGTATGGATTTAGGAGAAGGAGGCTCACTAACTACTATGACTGTAGCCTCATGGCTGGAAACATGAACCTCATGGAAGCCCCAACCCCATATTCATGTCCTGTTGTTCTTAATGAGGCACCAAAAACCCTCACTCTTTTCTCAGAGAAAACTCCTTTATTTCCTATTTCGCCATTTGAAGAAGGTGGTAGCGGCAACGCAAGTGGTAGCAGCAACAATACCATCAACTATGGGTCCCAGATGCTTCCAAGTGATGCAAGCATTTCCTTGACTACTAGTGATAATGAAGGCATTGATTTGGAGCTTCGCTTAGGTTGA 804 0.4254 MANEIVDPTNSPPSPPRTSSNAPIIFLNFGDSSSTNVQLQSSPMPLWSNMNLTYYRQNALWPASSHIYEPFHFPFSFQPSMDGNRVFTVLEPVPEAKSFLFPHGVRFKEPWTEREHELFLMGLIKFGKGHWSEIAKYFLLNKTPQQVQNYAASFYRHLPATYLYGFRRRRLTNYYDCSLMAGNMNLMEAPTPYSCPVVLNEAPKTLTLFSEKTPLFPISPFEEGGSGNASGSSNNTINYGSQMLPSDASISLTTSDNEGIDLELRLG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0171 267 SUPERFAMILY Homeodomain-like 110 158 IPR009057 -
Lja6g0171 267 CDD SANT 110 158 IPR001005 -
Lja6g0171 267 Gene3D - 109 159 - -
Lja6g0171 267 ProSiteProfiles SANT domain profile. 106 159 IPR017884 -
Lja6g0171 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 159 IPR017930 -
Lja6g0171 267 SMART sant 107 157 IPR001005 -
Lja6g0171 267 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 24 267 - -
Lja6g0171 267 Pfam Myb-like DNA-binding domain 108 150 IPR001005 -
Lja6g0171 267 ProSiteProfiles Myb-like domain profile. 108 155 IPR001005 -
Lja6g0171 267 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 24 267 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lja6g0171 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0171 - - gmx:102663307 229.95