Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0155 ATGGACATGGACATGGAGGACATGGACATTCCCCTCCCGGAAGAGCTCGAATTGCTCGAATCCGAATCTCATCTCTACGAACAAGACTTCTACTACCCTCCAGACTTCGATGATGCAACCGAACCCCAACCCGAACAACCGCACCCAGATCTCGCACTTCCTTCTGAACCCGAAACCAGCAACCACAAGCGTTCTCGTTCCTCTTCTCCTTCGGGTTTGGATCCTTCCGATCAAGAGAAAAGAGCCAAGGTTAGGGTTAGTTTAGAGGATTCCCACTCCGACGACGACGAGTGGCTTCGTTTCTCTCCCACTCCCGTTCCAGCTGAACAACCGAAGTCCTGGAAGGATGGGACGCTGTCGCGGTACGCGTCGGAGATTGACGGTGAGTTTATGCCGGTCACCGCGCCCAATGGGGACAGGGTTTACGCCAAGCTGGACCGGTTCCTAGGAGATGAACGGGCTACGAAGCTGTCTTGCAGAGAAAATTCATCTGATCTTTGTTTAGAACCGATTAGTAATCTGTTTCAAAAGTTGGAGCAAGAGACTTTAGATAAGACGTTGCAAGCTAGCTTGGAAAGCCAAAGTGTTGAAGATGTTACAGAAACACAAACGGTCCATGAGAAACTTTGGGTGGACAAATATGCTCCCAAATCGTTTACTGAACTTCTTAGTGATGAACAGACAAATCGTGAGGTACTCCTGTGGTTGAAGCTCTGGGACTCTACTGTGTATGGATCTGAAATTCGAAATACGTCAGATGAAGTTTTGTCGGCTTTGAAGCAACATTCTTCTGTCACCCAAAATCATAAACCTTTAGATTCAAAGTTTCCGAGGAAAAACAGGGAATCCAAATGGAGTAGTAGAAGTTATGCAAATTCTACAAGTACGGATGAATGTGATAATTCAAAGACTATTCAGGATGCATGGAATTCAAAGTCAAGGACTATTGGTCCACCAGAACAGAAGATCCTTTTGCTCTGTGGACCACCGGGTCTTGGAAAAACAACACTAGCACATGTAGCTGCTAGGCACTGTGGATATGATGTGTTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAGCAATTGAAGCAAAAATCCGTGATGTGGTTGAGATGAACTCTGTCTTGTCTCATTCAAGGCCGAAGTGTCTGGTGGTGGATGAAATTGATGGAGCCCTTGGTGATGGTAGGGGTGCTGTAGAAGTTCTTTTAAAACTGGTTTCTGCTGAAAGGAAGCAAAATGGAGGCAATAAAAGTTTGGGCGAGCGACAGCTAGATGGGAAATCATCAAAGAAGAGGCAGAAAACTGCATCACTGTCAAGACCTGTGATTTGCATATGCAATGACCTATATGCACCTGCGTTAAGACCATTACGTCAGGTAGCCAAGGTCCATATATTTGTTCAACCAACAGTTAGCCGTGTGGTAAGCAGGCTAAAATATATATGTTACAAGGAGGGGATGAAAGCCACTGCAATTGCACTCACTGCTCTCGCTGAATATACAGAATGTGATATACGCTCATGCTTGAACACTCTCCAATTTGTGTCTAAGAAAAAAGAAACCCTCAATGCAATTGATATTGGTTCTCAAGTAGTTGGCCAGAAGGACATGTCAAAGAATGTTTTAGACATCTGGAAACAGTTTTTCCAAAGGAAAAGAACGAAAAAGATGGAAAGGGAATCTCGTAGAAGCAAGTCCTTTGAATTTGACTACTTGTACTCCCTTATATCAAACCGTGGTGATAGTGACTTATTTCTGGATGGAATTCATGAGAACATTTTGCAGCTCAATTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGTTTCAACAGTCTTGGAGTTTATGATCTAATGCATCAATATATAATGTGCACACAACAAATGCGCATTCATGTTTATTTGCCTGCTATAGCAGTTAACATACATCATATAGTAGCTCAAGTTCAGAAGCCAAATATTGAGTGGCCGAAGTCATATCAAAGGTGTAGAGCAATGATGATGGAAAGGATGGACATTTTAAAGACCTGGCACTACCAAATATCACCATCTATTGCAAGGAACTTATCAGCTAGTTCCTTTGTTGAAGACTTAATATCCCCATTGTTACATATCCTGTCCCCACCAACTATAAGACCGGTGGCCTTACAACTGCTATCAGATAAGGAGAAGAATGATCTTGCTGAATTAGTTAGCACAATGGTCTCATACGCTGTAACATACAAGACTATGAAACCGGATATACTGCTTCATACTGTGAAGTATGAAGGAGCAGATGACTTGGGTCTGTCACTTGTTCCCCCGATCAGTAACTTTATAAACTTTAAGGACTATACTTCAAACCATTATGTTCTTTCTTTAGCCATGAAGAAGGTCTTGGTGCATGAAGTTGAAAAGCATAAGATTTTACATGTTAATAATGACAAAACTGTGGCTTCAGTGAATGGAGGGCATGAAATTATTGATGCTGGAACTAACAAGGTCCCATTAGCCAATACCAATCGTGCAACTGCAGTTGATTTGAAAACCAACGAAAATCAGGCTAATGTTTTTGCAAGGCAATTAAACCCAAATCCCATTACAGTTTCACAAAACTCGAATCCCAATGGAAGTGCAAATGCAACAGACAAAGCGAAACTGCTTAAGATGGGAAAATTGAAGAAACCATCCAGTAGTTCAAGTTTCTTTGACAGGTTTAAAAAGTTGAATGTCAAGGGTCTCCAAAATGATAGATCTCAACAGAAAGAAGCTACTTTGGAGAAACATCGATGCCCTTTACTTTTTAAATTTAATGAGGGTTTTACTAATGCTGTCAAAAGGCCTGTTCGAATGCGTGAATTTCTTTCCTAA 2856 0.4195 MDMDMEDMDIPLPEELELLESESHLYEQDFYYPPDFDDATEPQPEQPHPDLALPSEPETSNHKRSRSSSPSGLDPSDQEKRAKVRVSLEDSHSDDDEWLRFSPTPVPAEQPKSWKDGTLSRYASEIDGEFMPVTAPNGDRVYAKLDRFLGDERATKLSCRENSSDLCLEPISNLFQKLEQETLDKTLQASLESQSVEDVTETQTVHEKLWVDKYAPKSFTELLSDEQTNREVLLWLKLWDSTVYGSEIRNTSDEVLSALKQHSSVTQNHKPLDSKFPRKNRESKWSSRSYANSTSTDECDNSKTIQDAWNSKSRTIGPPEQKILLLCGPPGLGKTTLAHVAARHCGYDVLEVNASDDRSTSAIEAKIRDVVEMNSVLSHSRPKCLVVDEIDGALGDGRGAVEVLLKLVSAERKQNGGNKSLGERQLDGKSSKKRQKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSRLKYICYKEGMKATAIALTALAEYTECDIRSCLNTLQFVSKKKETLNAIDIGSQVVGQKDMSKNVLDIWKQFFQRKRTKKMERESRRSKSFEFDYLYSLISNRGDSDLFLDGIHENILQLNYHDPVMQKTVKCFNSLGVYDLMHQYIMCTQQMRIHVYLPAIAVNIHHIVAQVQKPNIEWPKSYQRCRAMMMERMDILKTWHYQISPSIARNLSASSFVEDLISPLLHILSPPTIRPVALQLLSDKEKNDLAELVSTMVSYAVTYKTMKPDILLHTVKYEGADDLGLSLVPPISNFINFKDYTSNHYVLSLAMKKVLVHEVEKHKILHVNNDKTVASVNGGHEIIDAGTNKVPLANTNRATAVDLKTNENQANVFARQLNPNPITVSQNSNPNGSANATDKAKLLKMGKLKKPSSSSSFFDRFKKLNVKGLQNDRSQQKEATLEKHRCPLLFKFNEGFTNAVKRPVRMREFLS* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0155 951 MobiDBLite consensus disorder prediction 1 16 - -
Lja6g0155 951 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 7 950 - -
Lja6g0155 951 CDD HLD_clamp_RFC 471 529 - -
Lja6g0155 951 MobiDBLite consensus disorder prediction 1 114 - -
Lja6g0155 951 Gene3D - 471 541 - -
Lja6g0155 951 CDD AAA 319 422 - -
Lja6g0155 951 Pfam ATPase family associated with various cellular activities (AAA) 324 449 IPR003959 GO:0005524|GO:0016887
Lja6g0155 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 527 IPR027417 -
Lja6g0155 951 MobiDBLite consensus disorder prediction 415 435 - -
Lja6g0155 951 MobiDBLite consensus disorder prediction 286 304 - -
Lja6g0155 951 MobiDBLite consensus disorder prediction 262 304 - -
Lja6g0155 951 MobiDBLite consensus disorder prediction 76 99 - -
Lja6g0155 951 Gene3D - 207 469 IPR027417 -
Lja6g0155 951 SMART AAA_5 320 474 IPR003593 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0155 321 518 Core DNA Replication Machinery Family AT5G22010 29.577 5.72e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0155 K11269 - gmx:100785041 1310.43