Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0117 ATGCATAACATTTCTCTCAACATGCCACCAATGGTCCAGAGCTTTGACCCTGAGGACCTCTTCACACGTCGCTGCATATGGGTGAATGGACCTGTCATAGTTGGTGCTGGTCCTTCAGGCCTTGCGGTGGCTTCTGGCCTAAAAGACCAAGGTGTTCCTTTCATCATCCTTGAAAGAGCAAATTGCATTGCCTCACTCTGGCAAAACAGAACCTATGATCGCCTCAAGCTTCACCTTCCCAAACAATTCTGCCAGCTACCCAATTTCCCTTTTCCTGAGGACTTTCCTGAGTACCCCACAAAGTTTCAGTTCATAAAGTACCTTGAATCCTATGCTAAGCACTTTAACATTAACCCACAGTTCAATGAAACAGTGCAATCTGCTAAGTATGATGAGACTTTTGGTCTTTGGAGGGTCAAGACCATTAGGAAAAGCACCAACACCCCCTCAGGTGGTGGTGGTAGTGAAATTGAGTACATTTGCAGGTGGCTTGTGGTTGCGACCGGAGAGAATTCAGAGAAAGTGGTGCCTGAGTTCGAAGGCTTTGACAAATTTGGTGGCCATGTCATGCATGCCTGTGACTACAAATCAGGCGAGAAGCATAAGGGTCAGCAAGTACTTGTTGTTGGGTGTGGAAACTCAGGCATGGAAGTTTCCCTTGATCTTTGTAATTACAATGCAAGCCCAACAATGGTGGTCAGAAGCTCGGTTCATGTCTTGCCAAGAGAGGTTTATGGCAAATCAACTTTTGAGGTTGCAGTTATGCTGATGAAAAGGTTTCCACTTTGGATGGTTGATAAGATATTGCTAATTCTAGCCCGTTTGATTCTGGGAAATATTGAGAAGTATGGTCTTAAAAGGCCATCAATTGGCCCTATAGAGCTGAAGAACACTGCAGGGAAGACCCCTGTGTTGGACATTGGGGCACTTGAGAAAATAAGATCTGGCCAAATCAAAGTGGTTCCTGGAATCAGAAGATTCTTCCAAGGGAAAGTGGAACTTGTTGATGGCAAAGTTCTTCAGATTGATTCTGTTGTTCTTGCTACTGGCTATCGCAGCAATGTACCATCATGGCTAAAGGAGAATGATTTCTTTTCAGAGGATGGGATTCCAAAAGATCCATTCCCAAATGGATGGAAAGGAAAAGCTGGTCTTTATGCTGTTGGTTTCACAAGGAGAGGCCTTTCTGGTGCATCTTTGGATGCAATGAGTGTGTCTCATGACATTGCCAAGAGCTGGAAAGAGGAAACTAAACAGAAAAAGAAAACAATGGCAGCACGCCACAGGAGATGCATATCACACTTCTAA 1308 0.4457 MHNISLNMPPMVQSFDPEDLFTRRCIWVNGPVIVGAGPSGLAVASGLKDQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPTKFQFIKYLESYAKHFNINPQFNETVQSAKYDETFGLWRVKTIRKSTNTPSGGGGSEIEYICRWLVVATGENSEKVVPEFEGFDKFGGHVMHACDYKSGEKHKGQQVLVVGCGNSGMEVSLDLCNYNASPTMVVRSSVHVLPREVYGKSTFEVAVMLMKRFPLWMVDKILLILARLILGNIEKYGLKRPSIGPIELKNTAGKTPVLDIGALEKIRSGQIKVVPGIRRFFQGKVELVDGKVLQIDSVVLATGYRSNVPSWLKENDFFSEDGIPKDPFPNGWKGKAGLYAVGFTRRGLSGASLDAMSVSHDIAKSWKEETKQKKKTMAARHRRCISHF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0117 435 SUPERFAMILY FAD/NAD(P)-binding domain 204 389 IPR036188 -
Lja6g0117 435 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 15 433 - -
Lja6g0117 435 PRINTS Pyridine nucleotide disulphide reductase class-I signature 30 52 - -
Lja6g0117 435 PRINTS Pyridine nucleotide disulphide reductase class-I signature 205 230 - -
Lja6g0117 435 PRINTS Pyridine nucleotide disulphide reductase class-I signature 164 173 - -
Lja6g0117 435 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 15 433 - -
Lja6g0117 435 Gene3D - 31 419 IPR036188 -
Lja6g0117 435 Pfam Flavin-binding monooxygenase-like 33 356 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja6g0117 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 205 223 - -
Lja6g0117 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Lja6g0117 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lja6g0117 435 SUPERFAMILY FAD/NAD(P)-binding domain 32 239 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0117 Lja-Chr6 2021840 2024037 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0117 6 2021840 2024037 Lja6g0117 6 2021840 2024037 ECH
Lja1g0963 1 9523792 9525731 Lja6g0117 6 2021840 2024037 PCT