Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0099 ATGGCGCTGCCGGAGTGCTCGGCGGCGAACCTAGCGCAGCTCATCGGCCCCAACGCGACAGACGCCGCCGCAGTCGCCGGATTCATCTGCGACCAGTTCACCGCCGTGGGTCAACGATTCTCCGACACAGCATTCGCGGTGGACAGCACCTACCTCCTCTTCTCCGCCTACCTCGTATTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTATCTCTTCGGTTTCGCCTTTGCCTTCGGCGCACCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAAGACGTCCCCACCGTAGCCTTCGACTACAGCTACTTCCTCTACCAGTGGGCGTTTGCCATCGCCGCCGCCGGGATCACCAGCGGCTCAATCGCTGAACGCACACAGTTCGTTGCCTACCTCATCTACTCGTCGTTCCTCACCGGGTTTGTCTACCCCGTCGTGTCTCACTGGTTCTGGTCCGGCGACGGTTGGGCCAGCGCCACCAACACCGGGAACTTGCTGTTTGGCACCGGGGTGATTGATTTTGCCGGGTCGGGTGTGGTTCACATGGTTGGTGGTGTTGCGGGTCTTTGGGGCGCGCTTATTGAGGGACCCAGGATTGGCCGGTTTGACCATGCCGGTCGAGCCGTTTCGCTTCGCGGACACAGTGCTTCGCTTGTTGTGCTTGGAACCTTCATGCTCTGGTTCGGTTGGTACGGTTTTAACCCCGGTTCGTTCACCAAGATTCTCAGCGCCTATGATTCAGGCAACTATTATGGTCAGTGGAGCGCAATAGGAAGGACCGCCGTAACGACAACATTGGCTGGCTGCACGGCGGCGCTGACCACCCTTTTCGGGAAAAGAATTATCTCCGGCCACTGGAACGTCACCGACGTATGCAACGGCTTACTCGGCGGGTTCGCAGCAATCACCGCCGGTTGCTCCGTCGTGGAGCCCTGGGCAGCCATCGTGTGCGGCTTCGTCGCCGCAGTGGTGCTTATCGCGTGCAACATGCTCGCAGAAAAGGTGCGTTACGACGACCCCTTAGAGGCAGCTCAGCTTCACGGCGGTTGCGGCGCGTGGGGGATCATATTCACCGCGCTATTCGCCAAGGAGGAGTACGTGAACCAGGTTTACCCGGGTAAACCGGGTCGGCCATACGGGTTGTTCATGGGTGGTGGAGGGAAGCTGCTCGGAGCGCACGTGATCCAGATTTTGGTGATTATCGGGTGGGTCAGCGCCACAATGGGTCCTCTGTTCTTCATTCTGAATAAGATGAAGTTGCTTCGGATCTCAACGGAGGATGAACTTGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCATATGCATATGAGGATGATGAATCGCACAAGCCAGGGATTCAGCTACGGAAGATTGAACCTAACTCTTCTTCCACTCCTAGTGCTGAGTCATGA 1506 0.5863 MALPECSAANLAQLIGPNATDAAAVAGFICDQFTAVGQRFSDTAFAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGRHFFGLKDVPTVAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASATNTGNLLFGTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVSLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYDSGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNMLAEKVRYDDPLEAAQLHGGCGAWGIIFTALFAKEEYVNQVYPGKPGRPYGLFMGGGGKLLGAHVIQILVIIGWVSATMGPLFFILNKMKLLRISTEDELAGMDLTRHGGFAYAYEDDESHKPGIQLRKIEPNSSSTPSAES* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0099 501 Gene3D Ammonium transporter AmtB like domains 29 490 IPR029020 -
Lja6g0099 501 SUPERFAMILY Ammonium transporter 47 453 - -
Lja6g0099 501 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lja6g0099 501 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 494 - -
Lja6g0099 501 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lja6g0099 501 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lja6g0099 501 PANTHER AMMONIUM TRANSPORTER 5 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0099 Lja-Chr6 1711590 1714637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0099 5 501 Inorganic Solute Cotransporters AT4G13510 81.162 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0099 K03320 - egt:105950262 830.091