Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0084 ATGACAACCGAAGCGGCCGTTGAAGACGTTGCGGCGGCGCCAGTGCCAGTGCCGGCACCGGAGACGGGTTTGAAGAACAAATTGGACAGAAAGTGGACTTTCTGGTTCGATAACCAATCGAAACCCAAGCAAGGTGCTGCTTGGGGAACCTCTCTTCGCAAGGTTTACACCTTCGACACCGTCGAGGAGTTCTGGTGTTTGTATGATCAGATATTCAAGCCCAGCAAGCTTCCTAATGGTGGGGACTTCCACATGTTCAAGGATGGGGTTGAACCAAAGTGGGAAGATCCTGAGTGTGCCAATGGAGGAAAATGGACTGTCACCAGCAGCAGGAAGGGCAATCTTGATACCATGTGGCTTGAAACTCTGATGGCTTTAATCGGGGAGCAACTTGAGGATGCTGAGGACATTTGCGGTGTGGTTGCAAGTGTGCGCCAGTGGCAGGACAAACTTTCATTATGGACAAAGACAGCAGCAAATGAAGCTGCACAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTACCGACAAGATAACATATAACTTCCATGAAGATGCTAAAAATCGAGGTGCAAAGGCTCGATACACTGTATAA 603 0.4876 MTTEAAVEDVAAAPVPVPAPETGLKNKLDRKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPNGGDFHMFKDGVEPKWEDPECANGGKWTVTSSRKGNLDTMWLETLMALIGEQLEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVTDKITYNFHEDAKNRGAKARYTV* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0084 200 Gene3D RNA Cap, Translation Initiation Factor Eif4e 21 200 IPR023398 -
Lja6g0084 200 SUPERFAMILY eIF4e-like 17 195 IPR023398 -
Lja6g0084 200 ProSitePatterns Eukaryotic initiation factor 4E signature. 82 105 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lja6g0084 200 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lja6g0084 200 PANTHER BNAA05G12740D PROTEIN 1 191 - -
Lja6g0084 200 Pfam Eukaryotic initiation factor 4E 28 182 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0084 Lja-Chr6 1534740 1538832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0084 11 200 Eukaryotic Initiation Factors Gene Family AT5G35620 63.918 4.93e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0084 K03259 - gmx:100499799 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0084 6 1534740 1538832 Lja6g0084 6 1534740 1538832 ECH