Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0058 ATGGCTGGACAACTGGGGTTGCTCAATACACTTGATTTGGCCAAGACACAATGGTATCACTTCACTGCAATTGTGATAGCTGGAATGGGTTTCTTCACTGATGCCTATGATCTGTTTTGCATTTCCCTTGTCACCAAGTTGCTGGGGCGGATATATTACACAGAACCAAATGCACCAAAGCCCGGAACTCTTCCTCCTAATGTCCAAGCTGCTGTCACTGGTGTTGCATTGTGTGGAACATTAGCAGGCCAACTGTTCTTTGGTTGGCTTGGTGACAAGATGGGGAGAAAAAAAGTCTATGGTTTAACTCTTGTTCTCATGGTAGTGTGTTCCATTGCCTCGGGTCTCTCTTTTGGATCAAGTGCAAAGAGTGTCATGGCATCACTATGTTTCTTCAGGTTCTGGCTTGGATTTGGGATTGGTGGTGACTACCCTCTTTCTGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGCGCATTCATAGCTGCAGTGTTTGCCATGCAAGGATTTGGAATCCTGGCTGGTGGGATAGTTGCCTTGATTGTATCAACTATATATGACCACAAATACAAGATTCCTACATATCAAGAAAATCCAGAAGCATCCATAGTACTGCCTGAATTTGATTATGTTTGGCGTATTATTTTAATGTTTGGTGCAGCCCCAGCTGCACTCACTTACTACTGGCGTCTGAAAATGCCGGAAACAGCTCGCTACACAGCCCTTGTTGCCAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTGAATGTCGAACTTGAAGTTGAGCAAGAAAAGTTGCAGAAAATTACAGAAGCAGATAACAATAAGTTTGGTTTATTCAGCAAGGAATTTGCCAAGCGCCATGGGCTGCATTTGCTGGGAACTAGTTCCACTTGGTTCTTGTTGGACATAGCATTCTACAGCCAGAACCTTTTCCAGAAAGACATATTCAGTGCAATTGGATGGATCCCTCCAGCTAAAGAAATGAATGCCATCCATGAAGTTTATAAGATTGCAAGAGCACAGACACTCATAGCACTTTGCAGCACTGTGCCAGGTTACTGGTTCACAGTAGCACTTATAGATTACATGGGTCGTTTTGCTATCCAACTGATGGGATTCTTCTTCATGACCGTCTTCATGTTTGCTCTGGCTATACCTTATGATCACTGGACCGAGAAAGACAACAGAATTGGGTTTGTTGCGATGTACTCACTCACCTTCTTCTTTGCCAACTTTGGCCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATCTTCCCAGCAAGGCTAAGGTCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTTGGTGCATTTGGCTTCTTATATGCTGCACAAAGTAAGGACCCCTCCAAGACTGATGCAGGGTACCCAACTGGTATTGGGATTAAGAACTCCCTCATTATGCTTGGTGTGATCAACTTCGCTGGGATGTTATTCACCTTATTGGTTCCAGAATCAAAGGGAAAATCACTAGAGGAATTGACTGGGGAGAATGAAGATGGTGCTGAGGGGATTGAGGGAGTAGGTTCTGCAAGGACAGTTCCAGTTTGA 1611 0.4438 MAGQLGLLNTLDLAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTEPNAPKPGTLPPNVQAAVTGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLVLMVVCSIASGLSFGSSAKSVMASLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSTIYDHKYKIPTYQENPEASIVLPEFDYVWRIILMFGAAPAALTYYWRLKMPETARYTALVAKNAKQAASDMSKVLNVELEVEQEKLQKITEADNNKFGLFSKEFAKRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVALIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTEKDNRIGFVAMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPSKTDAGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELTGENEDGAEGIEGVGSARTVPV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0058 536 Pfam Sugar (and other) transporter 24 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja6g0058 536 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Lja6g0058 536 CDD MFS_PhT 24 507 - -
Lja6g0058 536 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lja6g0058 536 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 526 - -
Lja6g0058 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Lja6g0058 536 MobiDBLite consensus disorder prediction 513 536 - -
Lja6g0058 536 Gene3D MFS general substrate transporter like domains 270 529 IPR036259 -
Lja6g0058 536 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Lja6g0058 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0058 Lja-Chr6 1104864 1106474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0058 1 523 Inorganic Solute Cotransporters AT3G54700 81.107 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0058 K08176 - gmx:100780201 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0058 6 1104864 1106474 Lja6g0058 6 1104864 1106474 ECH