Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0033 ATGCCTTTCAAGAGGTTCGTTGAGATTGGAAGGGTTGCTCTGGTTAACTATGGCAAGGAGTATGGGAGGCTCGTCGTCATCGTCGATATCATTGACCAGAACAGAGCTCTTGTTGATGCCCCTGATATGGTGAGATCCCAAATGAATCTCAAGAGGCTTTCCCTCACTGACATTAAGGTTGATATTAAGAGGGTCCCTAAGAAGAAGGATCTGATTCAAGCAATGGAGGCTGCTGATGTTAAGAACAAGTGGGAGAATAGCTCATGGGGCCGAAAACTGATTGTGAAGAAGAGACGGGCAGCTCTGAATGATTTTGATAGGTTTAAGATAATGTTGACAAAGATCAAGAGGGCAACTGCTGTAAGGCAAGAGCTTGCTAAGCTGAAGAAGAGTGCTGCTTAG 402 0.4502 MPFKRFVEIGRVALVNYGKEYGRLVVIVDIIDQNRALVDAPDMVRSQMNLKRLSLTDIKVDIKRVPKKKDLIQAMEAADVKNKWENSSWGRKLIVKKRRAALNDFDRFKIMLTKIKRATAVRQELAKLKKSAA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0033 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Lja6g0033 133 Gene3D - 1 84 IPR014722 -
Lja6g0033 133 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 133 - -
Lja6g0033 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Lja6g0033 133 Gene3D - 92 127 - -
Lja6g0033 133 CDD KOW_RPL14 7 79 IPR041985 -
Lja6g0033 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 133 IPR039660 GO:0003723|GO:0003735
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0033 Lja-Chr6 689723 691259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0033 1 133 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 83.459 4.32e-76 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0033 K02875 - gmx:100817659 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0033 6 689723 691259 Lja6g0033 6 689723 691259 ECH