Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0032 ATGGGAATGAGAGATTTTCGTATCAAGCTCAAGGCATTTAGGGTGAAACACTTTTTCTTAGGGAATGGAGGCAGAAAAAGGAATCGTGGGGTTGCAAATAAGCCTTCATGGATGATGCCAATAACACATGGTCATCATGTGGTGGAGCATAATGTGATCAAAGGTGATTCTGATGAGTTTGATTCAGTTGTGATACAGAGAGAGCAAATGGATCACACTGAAATTTGGTATTTTGGAATCTTTGATGCTCTAATTGGAGATGGGGTTACCAAGTATCTGCAATCCCATTTTTTTGACAAGATGCTCAAAGAGTCTCACATGAGGAGAAAAATCAAAGAAACACTCAAGAGAGCTTTTCTAGGCGCAAAAACTAAGACAAGAGAGGGACATAAATTAGAGGAGGCATGCATAACAGGGTCAACATCTGTGATGGTGATAAATGGTGAGAAACTTGTGATAGCCAACATGGGAGATTACAGAACTGTTTTGTGCAGAGATGGTAAAGCTTATCAGAAAACTGGCAGATATAATCAATCGCCTAAGAGACATTGGTATCGCAAACTATTTTCAGGGCACAAGTTTCTGTTCACACATCTCATAAGAATAGCATGTGAATCAGGAAACACAACAGGTAAAAAACAGCATTGTAATGGCTCAGAAGTTGTCGTGGGAGGGGATTGGATCGATTCTGACACTGAATTTTTGATTTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAATCAAGAGGCTGTGAATCTTATCAGGCACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCATTGATTAGGATGAGTAAAAGCAACATTTCATGCTTAATCGTTCGCTTTGATTGA 870 0.4011 MGMRDFRIKLKAFRVKHFFLGNGGRKRNRGVANKPSWMMPITHGHHVVEHNVIKGDSDEFDSVVIQREQMDHTEIWYFGIFDALIGDGVTKYLQSHFFDKMLKESHMRRKIKETLKRAFLGAKTKTREGHKLEEACITGSTSVMVINGEKLVIANMGDYRTVLCRDGKAYQKTGRYNQSPKRHWYRKLFSGHKFLFTHLIRIACESGNTTGKKQHCNGSEVVVGGDWIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMSKSNISCLIVRFD* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0032 289 Gene3D - 44 193 IPR036457 -
Lja6g0032 289 Pfam Protein phosphatase 2C 72 173 IPR001932 -
Lja6g0032 289 Pfam Protein phosphatase 2C 228 281 IPR001932 -
Lja6g0032 289 Gene3D - 221 289 IPR036457 -
Lja6g0032 289 PANTHER ALPHABET, ISOFORM E-RELATED 6 288 - -
Lja6g0032 289 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 288 - -
Lja6g0032 289 ProSiteProfiles PPM-type phosphatase domain profile. 57 288 IPR001932 -
Lja6g0032 289 SUPERFAMILY PP2C-like 65 289 IPR036457 -
Lja6g0032 289 CDD PP2Cc 61 288 IPR001932 -
Lja6g0032 289 SMART PP2C_4 39 286 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0032 Lja-Chr6 679636 683749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0032 1 288 PP2C-type Phosphatase Gene Family AT3G23360 44.291 3.07e-78 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0032 K19704 - gmx:100794054 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0032 6 679636 683749 Lja6g0032 6 679636 683749 ECH