Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0011 ATGGAATGCAGGAGCCCACTCTTGAGCATCAGCACTCATTCACACTGGTTTTTAGCGTCAACTCGCTTCCCCCAATTTTATTCTCTTCCTCTTCCAGTTCCTTTTAAGTATCTATCACCTTTCCCTTCCACGCTCAACGCAACAACCACACCAAAACCACTCTCTCTCATCGCCAGAAGATTCTCAGCCACGGCCATGGATAATCCAAAAGGTCAAGAATCCCCATCGGTATTGGATGAAGAAGCATTCGCACTTCCCTCTAAGTTACTTCAAGAATTCACATCCATGTCCACCATCGACAAGGCGTGGCTTTTCAAACCTGACACTCACATTGGTGGTAATGCTTCTACTCAGGGAATGTTTTGCGTGAGTCAACCGAACCTTTTGGCCAACAAGAGAAGGAAGTTCATTCTGTCGTCTACAATTTCCAAACAAAGTGACAGTGGTTCCGTGGAATTTGAGTGGGCTCCATTCCCTGTTGAGATGACTGGAGTCTCTGTGATGGTCCCTTCTCCATCTGCATCCAAACTTTTAATTGTTCGGAATCCCGAAAGCGGAGAAGGTACTCCTTCCCGCTTCGAAATTTGGACCTCCTCTCGTCTCGAAAAGGAGTTCCACATCCCCCAATCCAAGCACGCGTCAGTGTATACTGATGGATGGTTTGAGGGAATCTCTTGGAACTCGGATGAAACACATATAGCGTATGTTGCCGAAGAGCCATCCCCTCCAAAGCCTGCATTCAATGATTTGGGCTACAAGAAAGGTGGTTCTGATGACAAGGATTACGGTACCTGGAAAGGTCAAGGGGATTGGGAGGAGGGCTGGGGAGAAACATATGCGGGGAAGAGGCAGCCTGCGCTTTTTGTCATGAATATCACTAGTGGTGAGGTACAGGCTGTCAAAGGAATCGACAAATCCTTGAGTGTTGGGCAAGTTGTCTGGGCTCCATCGAATGAAGGCTCTGCTCAATACTTGGTCTTTGTTGGATGGTCTTTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCTTGTGCAGTATATGCTGTGAAAGCACCACACAAGTCAAAAGCTAATGAAACTGAGATTCAGTCTGTTGAAGATGTCAAGGCGTTTAACCTAACTAGAACCATAAGTAGCGCTTTCTTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTATATTTTTATCTGCAAGAAGTTGTGTTGATTCGGGAGCCCATTCTGCTACAAATTCACTGCATAGAATTGATTGGCCTAGGGATGTGGAACCTTATCAATCTGCAAAAGTTCATGATGTGATTCCAGTTGTGCTGTGTGCTGAGGATGGCAGCTTCCCTGGGCTTTACTGTTCAAGTATCCTTAGTGATCCATGGCTTTCTGATGGCTACACTTTGATTATACCCTCTATCTGGCACAGCAGTCAAGTTTTACTTTCTGTCAATGTGTTGAGTGGAGACACATTACGTATTACCCCTGCCGACTCAAATTTCTCTTGGAGTCTCCTTACGTTGGATGGGAACAATATTCTTGCTGTTTCAAGCAGTCCAGTAGATGTTCCTCAAGTCAAGTATGGAACCATTGTTAAGAAGGCAGCTGATAGTAATGACTGGAGTTGGTCAGATGTATCAAATCCTATATTTAAATGCTCTGACCAGGTTAGATCATTGTTGTCCTCTCGTATGTTCAGTGTAATGAAGATCTCAGTCAAGGATGCTTCTGAAAGTACAACAAAAGGTGCTAGTAAACCTTATGAGTCTATATTTGTGTCATCAAAAACTAAGAAAAGTGACACATGTGATCCACTAATTGTGGTCCTACATGGAGGACCGCACTCTGTCTCATTGTCAGGCTTTTCAAAGCCATTGGCTTTTCTTTCTTCACTTGGATATAGCTTGTTGATTGTAAACTACAGGGGTTCATTAGGATTTGGCGAGGAAGCCTTACAATCTCTTCCTGGGAAAATTGGATCTCAGGATGTGAATGATGTACTCACTGCTATTGATCATGTTGTAAACTTGGGACTTGCCAGTCCATCAAAGATTGCGCTGCTTGGTGGTTCACATGGTGGTTTTCTTACAACCCACTTGATTGGCCAGGCACCGGAGAAGTTTGTTGCAGCAGCTGCTAGAAATCCTGTTTGTAACCTTGGACTGATGGTTGGTACAACTGATATTCCTGATTGGTGCTTTGTGGAGACCTATGGAACCAGTGGCAGAAATAGGTTCACTGAAGCACCTTCAGCAGAGGATCTGGCTCTGTTTTATACCAAGTCTCCAATTTCACACCTCTCAAAGGTAAGAACACCAACGCTTTTTCTATTAGGTGCCCAAGATCTTCGTGTTCCAATTACGACCGGATTGCAATATGCTCGGGCTTTAAAGGAGAAAGGAGTACAAGTTAAAGTCATCGTATTTCCCAATGATACTCATGGAATTGAAAGGCCACAATCCGACTTTGAAAGCTTCCTTAACATTGGGGTGTGGTTCAACAAGTATTGCAAATGA 2511 0.4417 MECRSPLLSISTHSHWFLASTRFPQFYSLPLPVPFKYLSPFPSTLNATTTPKPLSLIARRFSATAMDNPKGQESPSVLDEEAFALPSKLLQEFTSMSTIDKAWLFKPDTHIGGNASTQGMFCVSQPNLLANKRRKFILSSTISKQSDSGSVEFEWAPFPVEMTGVSVMVPSPSASKLLIVRNPESGEGTPSRFEIWTSSRLEKEFHIPQSKHASVYTDGWFEGISWNSDETHIAYVAEEPSPPKPAFNDLGYKKGGSDDKDYGTWKGQGDWEEGWGETYAGKRQPALFVMNITSGEVQAVKGIDKSLSVGQVVWAPSNEGSAQYLVFVGWSFETRKLGIKYCYNRPCAVYAVKAPHKSKANETEIQSVEDVKAFNLTRTISSAFFPRFSPDGKFLIFLSARSCVDSGAHSATNSLHRIDWPRDVEPYQSAKVHDVIPVVLCAEDGSFPGLYCSSILSDPWLSDGYTLIIPSIWHSSQVLLSVNVLSGDTLRITPADSNFSWSLLTLDGNNILAVSSSPVDVPQVKYGTIVKKAADSNDWSWSDVSNPIFKCSDQVRSLLSSRMFSVMKISVKDASESTTKGASKPYESIFVSSKTKKSDTCDPLIVVLHGGPHSVSLSGFSKPLAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGKIGSQDVNDVLTAIDHVVNLGLASPSKIALLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLGLMVGTTDIPDWCFVETYGTSGRNRFTEAPSAEDLALFYTKSPISHLSKVRTPTLFLLGAQDLRVPITTGLQYARALKEKGVQVKVIVFPNDTHGIERPQSDFESFLNIGVWFNKYCK* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0011 836 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 80 357 IPR045550 -
Lja6g0011 836 Gene3D - 349 405 IPR015943 GO:0005515
Lja6g0011 836 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 76 836 - -
Lja6g0011 836 Pfam Prolyl oligopeptidase family 620 835 IPR001375 GO:0006508|GO:0008236
Lja6g0011 836 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 76 836 - -
Lja6g0011 836 SUPERFAMILY DPP6 N-terminal domain-like 161 519 - -
Lja6g0011 836 ProSitePatterns Prolyl endopeptidase family serine active site. 664 694 IPR002471 GO:0004252|GO:0006508
Lja6g0011 836 Gene3D alpha/beta hydrolase 583 834 IPR029058 -
Lja6g0011 836 SUPERFAMILY alpha/beta-Hydrolases 598 835 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0011 Lja-Chr6 352576 371633 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0011 603 819 Carbohydrate Esterase AT5G36210 26.728 1.13e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0011 K01303 - gmx:100803600 1287.71