Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0010 ATGTTTATTAGGAAGGAAAACAGAAATACCACATGGGTTTGGTCAAATATATCCAGTCCCATATTCAAATGCTCTGACAAGGTTAGATCTTTGCTGTCCTCTCTCCAGTGTAGCATATTGAAGATCCCAGTCCAGGATGCTTATGATGGAGCTGCTAAACCTTTTGAAGCTATATTTGTGTCATCTAAAACCAAGAACAAGAATGTAGTTGATCCACTAATTGTGATTCTTCATGGAGGGCCACAGGATGTCACTTTGTCACACTTCTCAAAGTCTTGGGCTTTTCTATCTTCAGTTGGATACAACTTGCTGATTGTAAATTCCAGAGGTTCATTGGGATTCGGTGAGGAAGCATTACAATCTCTTCCAGGAAAAGTTGGGTCTCAGGATGTCAATGATGTTCTCTCCGCTATAGATCAAGTTATCAATTTGGGTCTTGCCAGTCCATCCAAGATTACAGTGATGGGTAACTCACATGGTGGTTTTTTGACAACCCACTTAATTGGCCAGGAACCGGAGAAGTTTGTGGCAGCAGCAGATAAATTAGAAGGCCACAAGAAGGTAAAAGCACCAACACTTTTCCTATTAGGTGCTCAAGATCTTCGTGTTCCAATTTTTGATGGGTTGCAAGCCACAATCCGACTGGGAATGCATCCTTAA 660 0.4152 MFIRKENRNTTWVWSNISSPIFKCSDKVRSLLSSLQCSILKIPVQDAYDGAAKPFEAIFVSSKTKNKNVVDPLIVILHGGPQDVTLSHFSKSWAFLSSVGYNLLIVNSRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDQVINLGLASPSKITVMGNSHGGFLTTHLIGQEPEKFVAAADKLEGHKKVKAPTLFLLGAQDLRVPIFDGLQATIRLGMHP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0010 219 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 186 212 - -
Lja6g0010 219 Pfam Prolyl oligopeptidase family 88 179 IPR001375 GO:0006508|GO:0008236
Lja6g0010 219 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 1 179 - -
Lja6g0010 219 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 1 179 - -
Lja6g0010 219 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 186 212 - -
Lja6g0010 219 ProSitePatterns Prolyl endopeptidase family serine active site. 133 163 IPR002471 GO:0004252|GO:0006508
Lja6g0010 219 Gene3D alpha/beta hydrolase 46 218 IPR029058 -
Lja6g0010 219 SUPERFAMILY alpha/beta-Hydrolases 72 211 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0010 Lja-Chr6 347552 351408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0010 41 164 Carbohydrate Esterase AT5G36210 27.419 1.09e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0010 K01303 - gmx:100812681 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0010 6 347552 351408 Lja6g0010 6 347552 351408 ECH