Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0006 ATGGCAGAGACGAAATCGTTAGTGCGGAAGACAAGCATATCTCCAACGAGTACATGGATTAAGTTGGATGCTACTGGACATAGTTCCTTACTCAACATGGACAAGTATGACATCATTCATCGGTTAAAGATTCATGCTCGAGATCTCCGGATTCTCGATCCTATTCTCTCTTATCCCTCTACCATTCTTGGCAGAGAAAAGGCTATTGTTCTTAACTTGGAGCATATCAAGGCAATCATCACTGCTGAAGAGGTGTTTTTGCTAGATCCAGCGGATGAAAATGTGGTACCTGTTGTTGAGGAGCTACAAAGGAGGTTATCTGCCATTGATACAAATCAAGGAGATGATTATGATATTGAAATAGATGAAAACAATGAGTCACCCTTTGAGTTTCGGGCACTAGAGGCACTGTTAGAAGTAGTTTGTAGCTACCTTGCCGCACGTACAAAAGAATTAGAGATGGCTACCTATCCTGCACTAGATGAACTTACCACCAAGATTACTAGTCGTAATTTGGACAAAGTTCGTAAATTGAAGAGTGCTATGACGAGGCTAACCGCTAGGGTTCAAAAGGTAAGAGATGAACTTGAACAATTAATATATGATGATGACAACATGGCTGACCTATACTTATCGAGAAAGTCGTCAAAGTTATTAAGTCCATTAGATGTTTCCAGTTGGTTTGTTACATCCCCTACCAGAGGATCTAAACTATCAAATGGAGATGAAAACGATGTGGAGGAGCTAGAAATGTTATTAGAGGCTTATTTTATGGACATTGATCACACATTCAACAAATTGACAACGCTGCGAGGGTACGTCGATGATACTGAAGATTATATCAATATCCAGATTGACAACCATCGAAACCAATTAATTCAGTTAGAGCTATTTCTTAACGCGATTGAACTTTCTTTGGCCTTTTATTCATTGGTGACTGGAATACTTTCCATGAATTTTCCACTTTCTTGGAATAAAAATCATGGTTACTTATTCAAATGGGTGGTCCTTTTTACAGCAATTTTATCCGCTATTATGTTTCTCGCGATAATTACCTCTCCTAGAAAAAAGGGGTTGGTAGGATCATGA 1089 0.3893 MAETKSLVRKTSISPTSTWIKLDATGHSSLLNMDKYDIIHRLKIHARDLRILDPILSYPSTILGREKAIVLNLEHIKAIITAEEVFLLDPADENVVPVVEELQRRLSAIDTNQGDDYDIEIDENNESPFEFRALEALLEVVCSYLAARTKELEMATYPALDELTTKITSRNLDKVRKLKSAMTRLTARVQKVRDELEQLIYDDDNMADLYLSRKSSKLLSPLDVSSWFVTSPTRGSKLSNGDENDVEELEMLLEAYFMDIDHTFNKLTTLRGYVDDTEDYINIQIDNHRNQLIQLELFLNAIELSLAFYSLVTGILSMNFPLSWNKNHGYLFKWVVLFTAILSAIMFLAIITSPRKKGLVGS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0006 362 Coils Coil 175 202 - -
Lja6g0006 362 PANTHER MAGNESIUM TRANSPORTER MRS2-I 13 362 - -
Lja6g0006 362 Gene3D - 5 90 - -
Lja6g0006 362 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 362 IPR039204 -
Lja6g0006 362 CDD Mrs2_Mfm1p-like 19 359 IPR039204 -
Lja6g0006 362 Pfam CorA-like Mg2+ transporter protein 248 350 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja6g0006 362 Gene3D Magnesium transport protein CorA, transmembrane region 93 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0006 Lja-Chr6 245594 254848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0006 2 335 MRS2 Gene Family AT5G64560 64.525 7.80e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0006 K16075 - gmx:100810239 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0006 6 245594 254848 Lja6g0006 6 245594 254848 ECH