Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3362 ATGGTGGAGAAGCTGCTGACGGTGCCGCCATTTGAGTGCGCGTGGCGAGAGGATTTGAAGTTCCGGGAAGCAGGTCGGGGTTGCGTGGCATTCGAAGCATTCGCCTGCAACGATGTGACGCTGGTTTTCCGGGAGAATGTGGGAAGCCAGGGCTACCATTACAAGAGAGACAGCACTCCTCACTACACGATCATATTGGGGAGTCATCGAAATCGACGCCTCAAAATCGAGGTCAATGGGAAAACCGTCGTTGACGCCGCCGGGGTTGGACTCTGCTGCTCCACCTCGTTTCAGAGTTATTGGATCAGCATCTACGATGGCTTGATTAGTGTCGGTAACGGCAAATACCCTTTTCAAGATCTTGTTTTCCAGTGGTTGGATTCTCATCCCAATTGTAATGTTCAGTATATTGGACTCAGTAGCTGGGATAAGCATGTTAGGTATCGAAACGTTAATGTTCTTTCTCATCTGCCTCATGTTCAGGAGGAGATGGATTTAGATTATGACAAATGGGGTCTCAAAAATTTCCTTCAGACTTGGGACTTGTCTGACATGTTATTCATTGTTGGTAAAGACCAACGACCTGTTCCTGCTCACAAGACAATTTTATCTGCATCTGGAAACTTCTTTTCTTCTTCTTCCTCCTCATCTTCCTTTGTCATCACACTACCCTCGGTATCTTATCCGCTTCTCCATGCTCTGCTTCACTACATCTACACTGGCTGGACTCGGATTCCACCGGAACAACTTGGTTCTTTGAGGGCTTTAAGTCTACAGTTTGAAGTCATGCCACTGGTGAAGCAATGTGAAGAGATTATGGAACGATTTAAGCTAGATAACAAGTTGTTTGACGGGGGCAAGGATGTGGAGTTAACATATCCATGTATCCGACCTCATTGTTCAACTTTGCCATCACTCCCACTCAGCATTCAGAGACTGAAGCAATTGAAAGTAACGGGCCAGTACAGTGATGTAAACATCTACATTGAGAGTTATGGCCTTGTTGCTCGAGCACATAAAATTGTTCTCAGTTTATGGAGTATCCCCTTTGCTAAGATGTTCACAAATGGAATGAGTGAAAGCATGTCCTCTGACGTTACTTTACGAGATGTGCCACCAGAAGCTTTCAAGGCTATGCTTGACTTTTTATATGATGGTCAACTGAATGAGAAATTCATAGATTCTGGTTCTTTGTTGCTCCAGCTCCTTTTATTGGCTGATCAATTTGGAGTGACTTTTCTCCACCAAGAATGTTGCAAAATGCTCTTAGAATGCCTCTCAGAGGACTCGTTATGTCCACTCCTCCAAGTGGTTTCTTCAATCCCATCATGTAGCCTTATTAAAGAAACACTGCACAGGAGAATTGCCATGAACTTTGACTATTGTATCAGTGCAAGTACTGACTTTGTTATGTTAGATGAAACAACTTTCATCAATATCATTCAGCATCCTGATCTGACAGTAACATCTGAAGAGAAAGTTCTTAATGCAATCCTGTTGTTTGGCATGAATGCAAAAGACTTGTTTGGATGGGAAGTAGTGGATCAGTTAATAATCAATTCAACGCCAGAACTCCTTTTTGGCGGGAGGCTTCAGTTAGTTTATGACTTGTTGCCATATGTGCGATTTCCACTACTGCAATATTCCTTGCTTGATAAGTTGCAGAATAGCTACATTGTCTGCCACATTCCTGTTCTCCGAAGTCTTGTTAATGAGGCTATCAGTTTTGTTGATTATGGGCCAGGAAGGCCAGAAAATGAAGAAAATGTTAGACTCCAGCATAGACGGTCTAGTTACAGGGAGCTCCAGTACATTCGTGACGGGGACAACAATGGAGTTCTGTACTTTGCAGGCACATCCTATGGTGAACACCAGTGGGTTAATCCTCTTTTGGCAGAGCCAAAGAAAATTGCGATTACAGCCAGCAGTCCCCACTCAAGATACACTGATCCTAAGGTTTTGGTCTCCAGAACCTACCAGGGAACATGTTTTGCTGGGCCTCGATTGGAAAATGGACATAACTCTACCTGGTGGATGGTTGATCTTGGCCAAGATCATCAGCTTATGTGCAACTACTATACGCTGAGGCAGGATGGTTCCAAGGCCTTTCCGAGATGTTGGAATATTCAGGGTTCACTGGATGGGAAGAGTTGGAAGAACTTGAGAGTCCATGAAAATGACTGGACAGTGTGCAAACCTGGTCAATTTGCATCTTGGCCCATAACTGGCCCCAACGCACTGCTTCCCTTTCGGTATTTTCGGGTTGTTCTCACAGGATCCACTACTGATGCCACCAATCCCTGGAACTTGTGCATTTGTTACTTGGAACTATATGGATACTTCCTCTGA 2349 0.4436 MVEKLLTVPPFECAWREDLKFREAGRGCVAFEAFACNDVTLVFRENVGSQGYHYKRDSTPHYTIILGSHRNRRLKIEVNGKTVVDAAGVGLCCSTSFQSYWISIYDGLISVGNGKYPFQDLVFQWLDSHPNCNVQYIGLSSWDKHVRYRNVNVLSHLPHVQEEMDLDYDKWGLKNFLQTWDLSDMLFIVGKDQRPVPAHKTILSASGNFFSSSSSSSSFVITLPSVSYPLLHALLHYIYTGWTRIPPEQLGSLRALSLQFEVMPLVKQCEEIMERFKLDNKLFDGGKDVELTYPCIRPHCSTLPSLPLSIQRLKQLKVTGQYSDVNIYIESYGLVARAHKIVLSLWSIPFAKMFTNGMSESMSSDVTLRDVPPEAFKAMLDFLYDGQLNEKFIDSGSLLLQLLLLADQFGVTFLHQECCKMLLECLSEDSLCPLLQVVSSIPSCSLIKETLHRRIAMNFDYCISASTDFVMLDETTFINIIQHPDLTVTSEEKVLNAILLFGMNAKDLFGWEVVDQLIINSTPELLFGGRLQLVYDLLPYVRFPLLQYSLLDKLQNSYIVCHIPVLRSLVNEAISFVDYGPGRPENEENVRLQHRRSSYRELQYIRDGDNNGVLYFAGTSYGEHQWVNPLLAEPKKIAITASSPHSRYTDPKVLVSRTYQGTCFAGPRLENGHNSTWWMVDLGQDHQLMCNYYTLRQDGSKAFPRCWNIQGSLDGKSWKNLRVHENDWTVCKPGQFASWPITGPNALLPFRYFRVVLTGSTTDATNPWNLCICYLELYGYFL* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3362 782 Pfam Farnesoic acid 0-methyl transferase 50 146 IPR022041 -
Lja5g3362 782 SMART BACK_2 432 555 IPR011705 -
Lja5g3362 782 SUPERFAMILY POZ domain 310 423 IPR011333 -
Lja5g3362 782 Gene3D - 455 577 - -
Lja5g3362 782 ProSiteProfiles BTB domain profile. 323 392 IPR000210 GO:0005515
Lja5g3362 782 SUPERFAMILY Galactose-binding domain-like 638 781 IPR008979 -
Lja5g3362 782 Pfam F5/8 type C domain 639 770 IPR000421 -
Lja5g3362 782 PANTHER OS05G0345500 PROTEIN 3 781 - -
Lja5g3362 782 CDD BTB_POZ_ZBTB_KLHL-like 182 260 - -
Lja5g3362 782 Gene3D Potassium Channel Kv1.1; Chain A 171 283 IPR011333 -
Lja5g3362 782 Pfam BTB/POZ domain 314 424 IPR000210 GO:0005515
Lja5g3362 782 Pfam BTB/POZ domain 173 275 IPR000210 GO:0005515
Lja5g3362 782 ProSiteProfiles BTB domain profile. 183 247 IPR000210 GO:0005515
Lja5g3362 782 SMART BTB_4 323 426 IPR000210 GO:0005515
Lja5g3362 782 SMART BTB_4 183 277 IPR000210 GO:0005515
Lja5g3362 782 Pfam BTB And C-terminal Kelch 438 499 IPR011705 -
Lja5g3362 782 Gene3D - 631 780 - -
Lja5g3362 782 CDD BTB_POZ_ZBTB_KLHL-like 322 389 - -
Lja5g3362 782 Gene3D Potassium Channel Kv1.1; Chain A 305 454 IPR011333 -
Lja5g3362 782 SUPERFAMILY POZ domain 172 274 IPR011333 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3362 - - gmx:100810794 1358.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3362 5 65729165 65736874 Lja5g3362 5 65729165 65736874 ECH