Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3355 ATGGCGGAGGAGGAGTTAGAAAAAGTGGTCGAGAGTTTGCCTTCCGACGTCGTGAATGACTTGGCGTCCCTCGGGTTATGTAACCGCTGCATCTTTCGGGCGTTGGGGGTTCAAGGCCACCGCATCTATGCTTCTCCCTCTCTCTTCTTCCCTTCCATCCACCACCACCAACAACAACAACTCTGCACTCTCTGCTTAGGGATCCTCCAGTTCTCATTTTCTGATGACAGCGGAATCCTCCATAACAAGCAAAACGATGATGTCGCCCTTCTCATTGCTGATATGCTCAAACGACAACGCTATCACTTTGAATCCTTTTCCCTTGAAGTTTCCATCCCGCCTATTATCCTCCAAAACGACAACTCTCTCAGCTCATACATCAAAACCAAATACGGATCCCAACAAAATTTCCATGTTGGATGCATTTCTGCAAAGGATGCCTTGAAATTTTCTCTAGTACATCCTCTTCAAAATCTTCTGAAATCAAGTTTGCAGGAATGTAAATCAAGTGCGAGCTCTTTCCGCATTCGTTTGACATACACTCACTCTAAAGCGTCCAAAGGGGCTGAGAACTGCTCTGATACTGCTCAGGGTTGCAAGAGAAGAAAAACAGGTGAATCCAATTTAGTTGGAGAAAAGCCTTCTAACAGTTCACTAGAAAATGAAACCTCTGACTGCTGTAAATTCTTGCTAGAAACGGTAAATGAGCCTTGCCATTTTACTTACACTTGTTACAGGACACCTTTTTATTTTGGTGGAAGGTACCTGAAGTATTCACGGAATGTGAGTCAAACACGCTGGATCATTGATGATGAAAGAATGGGGGAAGCATCAGTTGAGGAAATTATAGGTGGAAACATCCTCCAAGCATGCCAAGCTGATAGTTTCAAGTTTCATGCTGCTGGTAGAGAAGACATTGATGTCCGAATGTTGGGCCCAGGAAGGCCATTTCTTGTTGAGGTGCAAAACTCGCGATATGTCCCATCGGAACTGTCTGTAGAAGATATAGAGAAACTGATTAATAACATGGAGAATAAATTGGTTAGAGTGAAAAATCTGAAACTCGTTGGTAGTCAAGGCTGGGAACTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAACAATACACTGCTTTAGTGTGGATTTCTCGTCCTCTGAAGGATGAAGATTTTCAATGCGTGTCTTCACTAAACGATTTGAAAGTTTTGCAGAGGACCCCAATAAGGGTGCTACACCGTCGTAGTCCTTTGGAGCGTGAAAAGATTATACATTGGATGAAAATGGAGACAGTTGCTGGAAGTTCCCAATATTTTCTTTTGCATCTATGTACACAGGCTGGGACCTACATCAAAGAATTCGTTCATGGGGATCTTGGACGCACACATCCTAGCATTGGATCAATTTTGGGTTGTAGAGCTGAGATTTTGCAACTTGATGTTACAGACATCAAAATGGAATGTTTCCTTACTTAA 1470 0.4313 MAEEELEKVVESLPSDVVNDLASLGLCNRCIFRALGVQGHRIYASPSLFFPSIHHHQQQQLCTLCLGILQFSFSDDSGILHNKQNDDVALLIADMLKRQRYHFESFSLEVSIPPIILQNDNSLSSYIKTKYGSQQNFHVGCISAKDALKFSLVHPLQNLLKSSLQECKSSASSFRIRLTYTHSKASKGAENCSDTAQGCKRRKTGESNLVGEKPSNSSLENETSDCCKFLLETVNEPCHFTYTCYRTPFYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQADSFKFHAAGREDIDVRMLGPGRPFLVEVQNSRYVPSELSVEDIEKLINNMENKLVRVKNLKLVGSQGWELMREGEAEKQKQYTALVWISRPLKDEDFQCVSSLNDLKVLQRTPIRVLHRRSPLEREKIIHWMKMETVAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECFLT* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3355 489 Gene3D - 249 372 - -
Lja5g3355 489 SUPERFAMILY Pseudouridine synthase 369 483 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lja5g3355 489 PANTHER BNAC07G15400D PROTEIN 8 484 - -
Lja5g3355 489 PANTHER UNCHARACTERIZED 8 484 IPR039894 -
Lja5g3355 489 Coils Coil 333 356 - -
Lja5g3355 489 Gene3D - 373 483 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3355 K07583 - gmx:100780683 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3355 5 65610534 65618190 Lja5g3355 5 65610534 65618190 ECH