Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3354 ATGTTGTCATCATCACCATATATTCATTGTCATTCACTCATTCTTCTTATACAAAATCTCATTCTTCTTCTTCATTCTTCATTCCTTAATACTAGCTACCTATTGTATTGTAGAATGGGCTCACTACCTGCACTTGACCAACCTCTCCAATATGAATATCCCACTGCTTGCAGAGACGACTCCGTTGTTGACGACTTCCATGGCGTTCAGATTTCCGACCCTTACCGATGGCTTGAAAATCCTGATGGGGAAGAAGTGAGAGAGTTTGTCCAGAAACAAGTCCAGTTGACGGATTCGGTGCTGCAAACATGCGAGTGCAGACCCAAACTTGGTCAAAAGTTAACGAGCCTCTTTGACCATCCACGTTATAGCACTCCTTTTAGACGAGCCAATTACTACTTTTACTTCCATAACACCGGCCTTCAGCCCCAGAGCGTCCTCTATCTTCAGATAAAAATCAATTGTTATTGTTTGAAGGAAGAACTCCATGAAAAAGATGATAGTTTGGAGGGTGAAGCAGAGGTTTTGCTGGATCCCAATGCCCTGAGTGAAGATGGCAGCGTCTCCCTCCGCACACTTTGTGTGAGCAAAGATGCTAAGTTCATGGCCTATGGGCTCAGTTCCAGTGGCAGCGATTGGGTCACCATAAATGTGATGCATGTTCAGAACAAGAATGTTGAGCCTCATACTTTATCCTGGGTCAAGTTTTCCTCCATTAGTTGGACGCATGATAGCAAAGGTTTCTTTTATAGCCGCTTTCCGGCACCCAAGGATGGAGAATCAGTAGATGCTGGGACTGAGACAAATGTGAACCTTCATCATGAGCTCTATTATCATTTTTTGGGTACAGATCAATCACATGATATTTTATGCTGGAGAGACCCTGACCACCCTAAATATTTATTTGAAGCAAGAGTTACGGATGACGGCAAGTATGTTTATCTCAATATTGAAGAAGGGTGTAGTCCAGTTAACAAACTCTACTACTTTGACCTGTCCAAACTTCCTAGCGGGTTGGAAGGTTTCCGGAATGAAAGTTCCCTCCTTCCCTTTGTCAAGCTTATTGATACCTTTGAAGCAAGGTATCAACCCATAGCAAATGATGACACAGTGTTTACATTTCTGACTAACAAAGATGCTCCAAAATATAAACTAGTTCGAGTAGATTTGAAAGAGCCAAATGCTTGGACTGATGTTATCTCAGAGTCTGAGAAAGATGTACTCAAATCAGCATGTGCAGTAAATGGTAACCAACTCATTGTGTGCTACTTGAGTGATGTCAAATGTGTTCTGCAAGTAAGAGACTTGGAAACGGGTTCCTTGCAGCATCAATTGCCAATTGATATTGGCACAGTTAATGATATTTCTGCTCGGCGTGAAGATACTGTGGTTTTCATTGGCTTTACAAGCTTTTTGACTCCTGGTATCATCTATCAATGCGACCTGGGAGCACAGATTCCTGATATGAAGGTATTTCGTGAGATTGTTATCCCTGGGTTTGACCGCTCTGAGTTTCATGTCAATCAGGTTTTTGTGCCTAGTAAAGATGGTACCAAGATCCCTATGTTTATTGTTGCCAGAAGGGGTATTACTTTGGATGGTTCACACCCTTGCTTGTTGTTTGGGTATGGTGGTTTTGATGTGAGTCTTACACCATATTTTAGTGCCAGTCGCATTGTACTGGCAAGACATTTAGGTGCATTGTTCTGCATAGCAAATATTCGTGGTGGTGGAGAATACGGAGAGGAATGGCACAAAGCAGGATCCCTTGCAAAAAAGCAAAACTGCTTTGATGACTTCATATCTGCAGCTGAATACCTTGTAACTGCTGGTTATACTCAACCCAGAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGCGCTTGTATAAACCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTCACCATAGGTCATGCTTGGACCTCAGATTTTGGGTGTTCAGATAATGAGGAAGAATTTCAATGGCTAATCAAGTACTCACCTTTGCACAATGTCCATAGACCATGGGAACAGCATCCTGATAAGTCAATTCAGTACCCAGCAACTATGTTGTTGACTGCTGATCATGATGATCGTGTTGTGCCATTGCATTCATTGAAGCATTTGGCGACCATGCAATACGTCCTGGTTACTAGCCTGGATAAAAGTCCACAGACGAATCCTATAATTGGTCGAATTGAATGCAAGGCTGGACATGGAGCTGGTCTTCCAACTCAGAAAATGATTGATGAAGCTGCTGACCGCTATGGTTTTATGGCTGAGATGTTAGACGCCCATTGGATTGATTAG 2364 0.4264 MLSSSPYIHCHSLILLIQNLILLLHSSFLNTSYLLYCRMGSLPALDQPLQYEYPTACRDDSVVDDFHGVQISDPYRWLENPDGEEVREFVQKQVQLTDSVLQTCECRPKLGQKLTSLFDHPRYSTPFRRANYYFYFHNTGLQPQSVLYLQIKINCYCLKEELHEKDDSLEGEAEVLLDPNALSEDGSVSLRTLCVSKDAKFMAYGLSSSGSDWVTINVMHVQNKNVEPHTLSWVKFSSISWTHDSKGFFYSRFPAPKDGESVDAGTETNVNLHHELYYHFLGTDQSHDILCWRDPDHPKYLFEARVTDDGKYVYLNIEEGCSPVNKLYYFDLSKLPSGLEGFRNESSLLPFVKLIDTFEARYQPIANDDTVFTFLTNKDAPKYKLVRVDLKEPNAWTDVISESEKDVLKSACAVNGNQLIVCYLSDVKCVLQVRDLETGSLQHQLPIDIGTVNDISARREDTVVFIGFTSFLTPGIIYQCDLGAQIPDMKVFREIVIPGFDRSEFHVNQVFVPSKDGTKIPMFIVARRGITLDGSHPCLLFGYGGFDVSLTPYFSASRIVLARHLGALFCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVTAGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDFGCSDNEEEFQWLIKYSPLHNVHRPWEQHPDKSIQYPATMLLTADHDDRVVPLHSLKHLATMQYVLVTSLDKSPQTNPIIGRIECKAGHGAGLPTQKMIDEAADRYGFMAEMLDAHWID* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3354 787 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 54 482 IPR023302 GO:0004252
Lja5g3354 787 SUPERFAMILY Peptidase/esterase 'gauge' domain 51 483 - -
Lja5g3354 787 Pfam Prolyl oligopeptidase family 552 782 IPR001375 GO:0006508|GO:0008236
Lja5g3354 787 PANTHER PROLYL ENDOPEPTIDASE 35 787 - -
Lja5g3354 787 ProSitePatterns Prolyl endopeptidase family serine active site. 599 629 IPR002471 GO:0004252|GO:0006508
Lja5g3354 787 Gene3D - 121 496 - -
Lja5g3354 787 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 592 611 IPR002470 GO:0004252|GO:0006508
Lja5g3354 787 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 622 642 IPR002470 GO:0004252|GO:0006508
Lja5g3354 787 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 704 726 IPR002470 GO:0004252|GO:0006508
Lja5g3354 787 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 537 555 IPR002470 GO:0004252|GO:0006508
Lja5g3354 787 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 564 588 IPR002470 GO:0004252|GO:0006508
Lja5g3354 787 SUPERFAMILY alpha/beta-Hydrolases 507 731 IPR029058 -
Lja5g3354 787 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 35 787 - -
Lja5g3354 787 Gene3D alpha/beta hydrolase 62 777 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3354 Lja-Chr5 65210618 65216986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3354 K01322 - gmx:100812955 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3354 5 65210618 65216986 Lja5g3354 5 65210618 65216986 ECH
Lja5g3354 5 65210618 65216986 Lja1g3459 1 43072521 43077874 PCT