Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3352 ATGGCGACGCCAGTGAAAGTGTACGGACCAGCCTTATCCACCGCCGTGTCGAGGGTGTTGGCATGTCTCCACGAGAAAGACACCCAATTCCAACTCATCCCAATCAACATGTCCAAAAGGGAACACAAAAACCCTGATTTCCTCAAGATTCATCCCTTTGGCCAAGTACCAGCATTTGAGGATGAGGACATTTCCCTCTTCGAATCGAGAGCGATATGCAGGTACATTTGTGAGAAACACAAGGAGAAAGGGAACAAGGAACTGTACGGAACGAACCCGTTGGCAAAGGCCTCCATAGATCAGTGGTTGGAGGCAGAAGGCCAGAGCTTCAACCCACCTTCTTCAACTCTGGTATTTCAGCTCGCATTTGCTCCGCGGATGAAGATTCCGCAGGATGAAGGAGCGATCAAGCAGAACCAGGAGAAGCTTGCGAAAGTGCTTGATGTCTACGATAAGAGGCTCGGAGAGACACGTTTCTTGGCAGGGGATGAGTTCTCTCTGGCTGATCTTTCTCATCTTCCGAATATTCACTATCTGGTCTCTGCGGATGCCGACACCGCTTCCCTCTTCACTTCTTCCTCTAGGAACAACGTCTCCAGGTGGTGGTCTGACATCTCCTCCCGTGACTCCTGGATCAAAACCGTTGATCTGCAACGAGCTCGTTGA 666 0.506 MATPVKVYGPALSTAVSRVLACLHEKDTQFQLIPINMSKREHKNPDFLKIHPFGQVPAFEDEDISLFESRAICRYICEKHKEKGNKELYGTNPLAKASIDQWLEAEGQSFNPPSSTLVFQLAFAPRMKIPQDEGAIKQNQEKLAKVLDVYDKRLGETRFLAGDEFSLADLSHLPNIHYLVSADADTASLFTSSSRNNVSRWWSDISSRDSWIKTVDLQRAR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3352 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Lja5g3352 221 SFLD Main (cytGST) 4 218 - -
Lja5g3352 221 Gene3D - 91 215 - -
Lja5g3352 221 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 218 - -
Lja5g3352 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 221 IPR010987 -
Lja5g3352 221 CDD GST_C_Phi 94 215 IPR034347 -
Lja5g3352 221 CDD GST_N_Phi 4 79 - -
Lja5g3352 221 Pfam Glutathione S-transferase, C-terminal domain 117 209 IPR004046 -
Lja5g3352 221 SUPERFAMILY GST C-terminal domain-like 85 216 IPR036282 -
Lja5g3352 221 Gene3D Glutaredoxin 2 90 - -
Lja5g3352 221 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
Lja5g3352 221 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Lja5g3352 221 SFLD Main.5: Phi-like 4 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3352 Lja-Chr5 65182895 65183709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3352 7 219 Glutathione S-transferase Gene Family AT2G47730 47.887 7.41e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3352 K00799 - rcu:8267851 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3352 5 65182895 65183709 Lja5g3352 5 65182895 65183709 ECH