Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3350 ATGGCCACAATCACCACCAGCAATTTCATATGCAAACCCCCTCTCTCTCCTTCCACTCACCGCAAACTCCTTCTTCGCTCCAGTTCCTTATCTATCACTTCTACTCTCACCAAAAATAAAACCCCAATTCAACTCAGAGCATCTCACTCTCACATCACAAAAGCCACAGCAGCTTCTTCCGGCACCAAGAAAGCAGAAAGAGATGAAAGAGTCCAGCGAGTCCACAGCATTGAAGAGTTCGACTCTGCGCTCCTATCCGCCAAAGACAAGCTCGTAGTGGTGGAGTACGCCCTCAGCGACAGTTCCGAGAGCAGCGAAATCTACCCTTTCTTGGTGGAGCTCAGCCGCACCTGCAACGACGTCGAGTTCCTTCTCGTAATGGGCGACGAGTCAGACAAGACAAAAGAGCTCTGTAAAAGAGAGAAAGTGGACAAGGTTCCCCACTTCACCTTCTACAAGAGCAGGGAGAAGATTCATGAAGAGGATGCGATCGGCCCTGACATGCTCGTCGGAGATGTTCTGTACTACGGTGACAGCCACTCTGCGGTGGTGCAGCTGCACAGCAGGGAGGATGTGGAGAAGCTGATTGAGGACCATAAGGTTGACAGCAAGCTCGTGGTGCTCGATGTGGGACTAAAGCACTGTGGCCCCTGCGTTAAGGTTTACCCTACGGTGATTAAGCTGTCGAGGTCGATGGCGGACACGGTGGTGTTTGCGCGGATGAACGGGGATGAGAACGACAGCTGTATGCAATTCTTGAGGGACATGGAGGTGGTGCAGGTGCCAACGTTTTTGTTCATCAGAGATGGTCAGATTCGAGGGAGGTATGTGGGTTCTGGGAAAGGAGAGCTCATTGGGGAAATTCTCAGGTACCAAGGGGTGCGTGTCACTTATTAG 897 0.5173 MATITTSNFICKPPLSPSTHRKLLLRSSSLSITSTLTKNKTPIQLRASHSHITKATAASSGTKKAERDERVQRVHSIEEFDSALLSAKDKLVVVEYALSDSSESSEIYPFLVELSRTCNDVEFLLVMGDESDKTKELCKREKVDKVPHFTFYKSREKIHEEDAIGPDMLVGDVLYYGDSHSAVVQLHSREDVEKLIEDHKVDSKLVVLDVGLKHCGPCVKVYPTVIKLSRSMADTVVFARMNGDENDSCMQFLRDMEVVQVPTFLFIRDGQIRGRYVGSGKGELIGEILRYQGVRVTY* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3350 298 ProSiteProfiles Thioredoxin domain profile. 159 294 IPR013766 -
Lja5g3350 298 SUPERFAMILY Thioredoxin-like 73 160 IPR036249 -
Lja5g3350 298 SUPERFAMILY Thioredoxin-like 177 285 IPR036249 -
Lja5g3350 298 MobiDBLite consensus disorder prediction 49 69 - -
Lja5g3350 298 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 1 298 IPR044192 GO:0016671
Lja5g3350 298 Gene3D Glutaredoxin 176 292 - -
Lja5g3350 298 Pfam Thioredoxin 75 160 IPR013766 -
Lja5g3350 298 Pfam Thioredoxin 198 283 IPR013766 -
Lja5g3350 298 Gene3D Glutaredoxin 58 171 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3350 - - cam:101508233 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3350 5 65171163 65172396 Lja5g3350 5 65171163 65172396 ECH