Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3344 ATGGCCGCTGGAGCAGGTGTTGGCTCCGCCGGCACGAAGACTGCCCTGATCACCGAAGTCATCACCGGGCGATGGTTCGTGGTGTTCGCCTCCTTCCTCATCATGTCAGTCTCCGGAGCCACCTACATGTTCGGCATCTACTCCGGCGACATGAAAACCACCCTCGGCTACGACCAAACCACTCTCAACCTAATCAGCTTCTTCAAGGACCTCGGCAGCAACCTCGGCATCTTCTCAGGCCTCATCAACGAGATCGCTCCGCCGTGGGTGGTCCTCGCCATGGGTTCTCTCCTCAACTTCTTCGGCTACTTCATGATATGGCTCGCACTCACAAAAAGAATCCCAAAACCCAGTGGCTGGCACGTGTGCCTCTACATCTACATGGGTGCGAATTCTCAGACATTTTCCAACACTGGTTCCTTAGTCACGTGTGTCAAGAACTTCCCACAAAGCCGTGGTGTTGTGTTGGGAATGCTCAAAGGCTATGTTGGACTCAGTGGAGCTATCATCACACAACTCTACTTTGCTTTCTATTACAATTACAGTGATGACTCCAAATCCAAGGCTTTGATTTTGCTCATAGCGTGGCTCCCTGCTGCCATCTCCTTCGTTTTCCTTCCGACAATTCGGTACATCAAGCCCGTCAATCAACGCAATGAGATCGCTGTTTTCTATAAGTTTTTGTACATTTCACTTGGCCTTGCTGGGTTTCTTCTAATCATGATTATAGTGCAGAAAACTGTCTCCTTTAACCAGATTGAGTATGGCGGAAGCGCTGCAGTGGTGCTTTTCTTGCTCTTCCTTCCACTTCTTGTTGTCTTCCTGGAACAGTTCAAGATTCGTCAGAGTCAGAAGCTTGCATGCGTTGATTCCTCGCCGCTGAAAATAGTCACTGAAACAGGGGGAAAACAGGGGAAAACAGAGTACTCTGTTTTAGCAAATGATGATAGTAACAACTCTGTTTCCTCTGTTTCAGCAAATGGTAATAATGCAATAGAAGAAACTAGGTGGTGGCACTGGAAGAACATTTTCAACCCACCTGAAAGAGGTGAGGACTATAACATACTTCAAGCCCTTTTCAGCTTGGACATGATATTGCTCTTCATTGCTGGGACATGTGGTGCTGGAGGAACTTTAACTGCAATTGACAACCTGGGTCAGATTGGAATCTCACTCGGGTACCCGAAGGCTAGCATAAGCACATTTGTTTCATTGGTGAGCATTTGGAATTACTTAGGAAAAGTGTTTTCTGGGTTTGTCTCTGAACATGTTCTAACAAAGTACAAATTCCCAAGACCTCTAATGCTGACTCTGACTCTGCTCTTAGCCTGTGTTGGCCATGTTTTGATAGCCTTTGACGTGCCCAATGGTCTCTATGCTGCTTCCGTGATCATTGGATTTTGTTTTGGTGCACAGTGGCCTTTGGTCTTTGCCATAATTTCGGAGGTGTTTGGACTCAAGTACTATTCAACATTGCATAACTTTGGTGGAATAGCGAGCCCAATTGGGCTATACGTGCTTAATGTGAGGATCACTGGGTATCTGTACGACAGAGAGGCTAAGAGGCAGTTGGAGGTAGCAGGGGTTTCAAGAGAGGTTGGACAAGAACTGAATTGTGTTGGGGCCAATTGCTTCAAGTTGTCATTTGTGATCATCACTGCAGCAACGTTATTTGGTGCCATTGTTTCCCTTGTTTTGGTAGCTAGAACAATCAAGTTTTATAAAGGTGACTTGTACAAGAGGTACAGGGAGGAGGCAGAAGGAGGTGCTGGTGAGACGGTGGTGGTCCAAAATGGCGGTGAGAGAGGACAAGAACGCAAAGTTGGGTTGTGA 1833 0.4697 MAAGAGVGSAGTKTALITEVITGRWFVVFASFLIMSVSGATYMFGIYSGDMKTTLGYDQTTLNLISFFKDLGSNLGIFSGLINEIAPPWVVLAMGSLLNFFGYFMIWLALTKRIPKPSGWHVCLYIYMGANSQTFSNTGSLVTCVKNFPQSRGVVLGMLKGYVGLSGAIITQLYFAFYYNYSDDSKSKALILLIAWLPAAISFVFLPTIRYIKPVNQRNEIAVFYKFLYISLGLAGFLLIMIIVQKTVSFNQIEYGGSAAVVLFLLFLPLLVVFLEQFKIRQSQKLACVDSSPLKIVTETGGKQGKTEYSVLANDDSNNSVSSVSANGNNAIEETRWWHWKNIFNPPERGEDYNILQALFSLDMILLFIAGTCGAGGTLTAIDNLGQIGISLGYPKASISTFVSLVSIWNYLGKVFSGFVSEHVLTKYKFPRPLMLTLTLLLACVGHVLIAFDVPNGLYAASVIIGFCFGAQWPLVFAIISEVFGLKYYSTLHNFGGIASPIGLYVLNVRITGYLYDREAKRQLEVAGVSREVGQELNCVGANCFKLSFVIITAATLFGAIVSLVLVARTIKFYKGDLYKRYREEAEGGAGETVVVQNGGERGQERKVGL* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3344 610 Gene3D MFS general substrate transporter like domains 359 574 IPR036259 -
Lja5g3344 610 PANTHER MFS TRANSPORTER 14 605 - -
Lja5g3344 610 Pfam Nodulin-like 24 274 IPR010658 -
Lja5g3344 610 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 605 - -
Lja5g3344 610 SUPERFAMILY MFS general substrate transporter 24 572 IPR036259 -
Lja5g3344 610 CDD MFS_Mch1p_like 23 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3344 Lja-Chr5 65116026 65117858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3344 11 585 Nodulin-like Gene Family AT2G39210 64.348 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3344 - - gmx:100808975 835.484