Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3343 ATGGATCGGTACCAGAAAGTGGAGAAGCCAAGGGCTGAAACGCCAATCGATGAAAACGAGATCCGGATTACTAGTCAGGGGAGGATGCGCAACTACATTACTTACGCCATGACCTTGCTTCAGGAAAAAGGTTCTAATGAAATTGTTTTCAAAGCAATGGGGAGAGCTATCAACAAGACAGTGACAATTGTGGAGTTGATCAAGAGGAGGATTGTGGGTCTCCACCAGAATACAGCAATTGGATCCACTGACATCACTGATACATGGGAGCCACTTGAGGAAGGCCTCCTTCCTTTGGAGACGACAAGGCACGTGTCAATGATTACAATAACCCTTTCTAAGAACGAACTTGATACAGCTTCTGTGGGGTATCAGCCTCCATTACCAGCTGATCAGGTGAAGGCTGCCACAGATTTTGATTATGAAGGAGAGAGTTCGCCTAATGGTCGTGGTAGGGGTCGTGGCGGTCGTGGCAGGGGTAGGGGCAGAGGGAATGGTTTCATTGCAGCTGATTATGAGGATGGAGGTTGGGATCGTTACAGGGGAAATGCCAGGGGCAGGGGTAGAGGAAGAGGACGTGGCTTCCGTGGTCGTGGAAGGGGAGGGTACAATGGGGGCCATGTTGATATGCTGCAAGATGGAGGATACAACCAAGATGTACCCCAAGGCCGTGGTCGTGGCCGTGGGCGAGGTGGATATCGTGGAAGGGGTCGTGGCTTTAGATCCAATGGTCCGATCCAGGCAGCTGCCTGA 753 0.5126 MDRYQKVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKNELDTASVGYQPPLPADQVKAATDFDYEGESSPNGRGRGRGGRGRGRGRGNGFIAADYEDGGWDRYRGNARGRGRGRGRGFRGRGRGGYNGGHVDMLQDGGYNQDVPQGRGRGRGRGGYRGRGRGFRSNGPIQAAA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3343 250 Gene3D - 14 118 IPR036882 GO:0003676
Lja5g3343 250 Pfam Alba 19 83 IPR002775 GO:0003676
Lja5g3343 250 PANTHER RIBONUCLEASE P SUBUNIT P25 1 246 - -
Lja5g3343 250 MobiDBLite consensus disorder prediction 182 250 - -
Lja5g3343 250 MobiDBLite consensus disorder prediction 140 166 - -
Lja5g3343 250 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Lja5g3343 250 PANTHER ALBA DNA/RNA-BINDING PROTEIN 1 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3343 Lja-Chr5 65115906 65122284 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3343 - - gmx:100818986 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3343 5 65115906 65122284 Lja5g3343 5 65115906 65122284 ECH