Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3304 ATGGTGAAATCTAGCTCCTGCTTGAGATTAATCACATGCGGCGGTGGTGCGGCGGAGAAAAATGATTACCAACCAGTATCGGAGATCAAAGATTCTAATGATAAAAGTGGTTGGAGTTTTCGCAAGAGATCTGCAAGGCATCGCGTGCTTAGCAATACTGTGATAACAGAGACCCCATCTTCCGCAAATAAAGAGACTTCAGAATGTAAAAGTATTAATTTTCAACCACTGGAACCTAAGGAGACTTCAGAATGTACCAGTATTAATGTTCAACCACAGGAACCTAATGTTGCTGAGAAGAATAACACAACAAATTTCTCCGATGAAAAGCCCCAATTAACCTCTAATGTTGCTGAGAAGAATAACACAACAGATTTCTCCGATGAAAAGCCCCAATTAACCTCTATTGAAAGGTCCGAGTTGTCTGAAACAATTGTCACTGAAACTGAGTGTAAGGTGGATGTCAGTGTGCCAGAATCTGTTGTAATCATTCTCCAAGCTGCCATTAGAGGATTCTTGGCTCAGAGAGCACTGCTGAAGAGTAAGAATGTAGTGAAGTTGCAAGCTGCTTTTCGCGGGCACTTGGAAAGGAGGCACGCTGTAGGAACACTGCGATGTGTTCAAGCTATTGTTAAAATGCAACTTCTCGTGCGAGCTCGACATGCTCAACAGTCACATTCAGATGTTCATTTAAATCACAAGGATGGCAAAAACGATTCAAAATCGGCTCGTGACCAGCATGTGACCAAATCAAATGTGACAAACACTTCCATAGAAAAGCTTGTCAAGAATAGGTTCGCTCGTCAGCTGTTGGAATCAACACCAAAAAAGAAACCCATCCATGTTAAATGTGATCCTTCTAAAGCTGATTCGGCTTGGAAATGGTTGGAGAGATGGATGACTGTTTCATCAAAAGATTCTGCAGAGAACAAAAAACCAATTAGTATGTCAGAACAATCAGTTGAAACCAAAGATAGCACTCCTACATCTCAACAATTGGAAACCAGTCTTCCATCTGAAGTATTTCTTCAATTGGCCGACTCAAAGCCTACTGTTGGGGATTCACCTCTGCCACATGAGGATGAAGAGAATACTGCTACTTATGATGCTAACGACTTCAACTTTCAAACAAGCCTCTCTGTACCTTCTCTTGTAAAAGATAACTTGGAGCAGGCTCCTCCAGAAAAGATTTTTACAGATGATGTGAAAGTAACATCAACGGAAATTGATTCCTTGCAAAATGAAAAAAAGGAGTCAGATGCAAGTGTCTTGCAGGAGCCTAGTTCTCCTCCTCTGAAGCCTGAAATTGATGGTGAGCAGTGCAAACAATCTATGGAAACATTTGTCTCCGATCCACAAGAGCCTGAGGGAAAGAAACTCTTACATGGGTCAAGGAAATTCAGTAATCCTGCATTTATTGCTGCACAATCAAAATTCGAAGAGCTGAGCTCAATGGCAAATTCAGGTAAGTCAAGCAGTTTGTCCAATCAAAATGCATCAGTTGAATCACCAGCAGACACCTCTTCAGTTGTCACAGATTCTGCGTATCAATCAAAAGAGTTCTTCTCAACTAAGAATTCTGCTTCTGGTGTTTCCGGAGTTGGTGGTTCTGAATGTGGGACTGAACTCTCTATTACTTCAACCCTGGATTCACCTGACAGATTAGAGGTTGAAACTATGGAAAATCAGCATGATGCCAAAGATTTAGTCAAAGGGATAGGTAGTCCTGAAAACAAGATGGATCATGTTGTTGAGGATAATATTCTGTGTGACACTCCAACTTCAAACTTACCTATCTCTGACTTGAATAAAATAGAACCAGTTTATGCTGCCGGCGGTGATATGGTTGATACAGTGGTGGTTGGAAACTCCAAAGAGACTGCTGTTGAGCCTGAAAAAAATTCATCTGAGCTGTCAAGAGATCAACAGACAGAAACTGTTCTGCAGGATTTCAAGTTGTCTCCAAAAGCTTCACCAGGAAGCCATGTGACCATCTCTGAATCTCAAGAAACACCTTCAAGTCAGGTATCAGTGAAGTCTAAAGGGAGTAAAACCGACAAGTCTGGATCAAGCAATCGGCGTAGAAAACTGTCTGTTGGTAACAAGTCTCCTGCAAATGCAAATCATGATTCAGGCTCAAGAGGTAGCAGAGAACCATTGCCTAAAGATCAGCAGAACGGAAAGAGGCGCAGTTCCCTCGGCTCAGTAAAACCTGATCACGTGGATCAAGAACCTAGAGATAATAGCAGTAACAACAATTCTGTTCCTCGTTTTATGCTTGCTACAGAATCTGCTAAGGCCAAGATAAGTGCGAATTATTCTCCAAGATCAAGTCCAGATGTACATGAGCAAGACATTCATGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAAGCAGGGTTCTCCCCGCGTCCAACATTCACCAGCTGAAGCTCAGCAGGGTACAAAGGGAAACGGCATACATAATCTTCATGAGAGAAAATGGCTGAGGTGA 2499 0.421 MVKSSSCLRLITCGGGAAEKNDYQPVSEIKDSNDKSGWSFRKRSARHRVLSNTVITETPSSANKETSECKSINFQPLEPKETSECTSINVQPQEPNVAEKNNTTNFSDEKPQLTSNVAEKNNTTDFSDEKPQLTSIERSELSETIVTETECKVDVSVPESVVIILQAAIRGFLAQRALLKSKNVVKLQAAFRGHLERRHAVGTLRCVQAIVKMQLLVRARHAQQSHSDVHLNHKDGKNDSKSARDQHVTKSNVTNTSIEKLVKNRFARQLLESTPKKKPIHVKCDPSKADSAWKWLERWMTVSSKDSAENKKPISMSEQSVETKDSTPTSQQLETSLPSEVFLQLADSKPTVGDSPLPHEDEENTATYDANDFNFQTSLSVPSLVKDNLEQAPPEKIFTDDVKVTSTEIDSLQNEKKESDASVLQEPSSPPLKPEIDGEQCKQSMETFVSDPQEPEGKKLLHGSRKFSNPAFIAAQSKFEELSSMANSGKSSSLSNQNASVESPADTSSVVTDSAYQSKEFFSTKNSASGVSGVGGSECGTELSITSTLDSPDRLEVETMENQHDAKDLVKGIGSPENKMDHVVEDNILCDTPTSNLPISDLNKIEPVYAAGGDMVDTVVVGNSKETAVEPEKNSSELSRDQQTETVLQDFKLSPKASPGSHVTISESQETPSSQVSVKSKGSKTDKSGSSNRRRKLSVGNKSPANANHDSGSRGSREPLPKDQQNGKRRSSLGSVKPDHVDQEPRDNSSNNNSVPRFMLATESAKAKISANYSPRSSPDVHEQDIHVKKRHSLPGATGKQGSPRVQHSPAEAQQGTKGNGIHNLHERKWLR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3304 832 MobiDBLite consensus disorder prediction 800 821 - -
Lja5g3304 832 PANTHER IQ-DOMAIN 5-RELATED 1 822 - -
Lja5g3304 832 PANTHER PROTEIN IQ-DOMAIN 32 1 822 - -
Lja5g3304 832 MobiDBLite consensus disorder prediction 659 685 - -
Lja5g3304 832 MobiDBLite consensus disorder prediction 92 111 - -
Lja5g3304 832 MobiDBLite consensus disorder prediction 650 832 - -
Lja5g3304 832 Pfam IQ calmodulin-binding motif 182 199 IPR000048 GO:0005515
Lja5g3304 832 Pfam IQ calmodulin-binding motif 162 177 IPR000048 GO:0005515
Lja5g3304 832 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Lja5g3304 832 MobiDBLite consensus disorder prediction 694 713 - -
Lja5g3304 832 Pfam Protein of unknown function (DUF4005) 745 803 IPR025064 -
Lja5g3304 832 SMART iq_5 180 201 IPR000048 GO:0005515
Lja5g3304 832 SMART iq_5 157 179 IPR000048 GO:0005515
Lja5g3304 832 ProSiteProfiles IQ motif profile. 180 209 IPR000048 GO:0005515
Lja5g3304 832 MobiDBLite consensus disorder prediction 223 246 - -
Lja5g3304 832 MobiDBLite consensus disorder prediction 222 254 - -
Lja5g3304 832 MobiDBLite consensus disorder prediction 411 437 - -
Lja5g3304 832 MobiDBLite consensus disorder prediction 486 509 - -
Lja5g3304 832 MobiDBLite consensus disorder prediction 306 338 - -
Lja5g3304 832 Gene3D - 159 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3304 Lja-Chr5 64067303 64073454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3304 137 832 IQD Protein Family AT1G19870 36.252 2.50e-105 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3304 - - aprc:113847201 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3304 5 64067303 64073454 Lja5g3304 5 64067303 64073454 ECH