Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3301 ATGGGGTGTCTTTTTCTTCTTTCTTTATTATCTATCGCCATTCTATTCATCATCCACAAATACAGAACATATGGTACAAGAGCAACTCTTCCACCTGGCCCTCCAACCCTTCCTCTAATCGGCAATATACACCAACTTGATAGCTCATCACTGCATCGCTGTTTATGGAAACTCTCCAAACGTTACGGACCTCTCATGATATTGCACCTTGGCTCTGTGCCATGTTTGGTGGTTTCCTCAGCAAAAATGGCCAAAGAAGTTTTGAAAACCCATGACCTCAAATTTGCAAGCAGACCACCTTTCCTTGGCATGAGGAAATTGTCTTACAATGGCTTGGACTTGGGTTTTGCACCTTATGGCCCTTATTGGAGAGAAATGAAAAAACTCTGTGCCCTCCACCTTTTCAGCTCTCAACGCCTCCAATCCTTTAGTAACATCAGAGAAAATGAAGTTTCCCAAATGATTCAGAAAATAGCAAAATATGATTCTTCAGAAAAAGCAGTGAACTTGACTGAAACATTGATGTCTTTCACAAATTCCCTAATATGCAGGATAGCTTTTGGGAGAAAGTACGGCTATGATTATGAGGAAGAATTGGAAATAGGAAATGACCAAAAGAAGAGTAGATTGCAGGTACTTCTCAATGAGGCTCAAGCTTTGTTGACAGAATTTTACTTTTCTGATCACTTTCCATTGATGGGGTGGGTTGATAGACTTAGAGGAACTCTGAGGAGGCTAGACAAAACCTTCAAGGAGTTAGATTTGATCTATGAACGAGTCATCCATGACCACATGAATCCAACAAGGCCTCAAACCAATGACCAAGAAGTTCCATATATCATTGATATTCTTGTGCAGATGATGAATCACCACTCATTCTCTTTTGATCTTACTCCCGACCATATAAAAGCTATTCTTATGAACATCTTTATAGCAGGAACAGACACTAGCTCAGCCATAGTAGTTTGGGCCATGACAGCACTATTGAAGAATGCTAGAGTGATGAGTAAGGTTCAGAGGGAAATCAGAGACTTGTTTGGTGACAAAGATTTTATAAGTGAAGATGATATTGAAAGGCTTCCTTATCTTAAAGCAATTGTCAAGGAGACTTTGAGGTTGTTCCCACCATCACCATTACTTTTGCCAAGGGAAACAATGGAAAGGTGCAACATAGATGGGTATGAGATTCCAGCAAGAACTCTAGTGCATGTAAATGCTTGGGCAATAGCAAGGGACCCTGAGAGTTGGGAAGACCCTGAAGAATTTTATCCTGAAAGGTTCATTGGGAGTTCAATAGACTTCAAGGGGAGAGATTTTGAGTTGATTCCATTCGGAGCAGGAAGGAGAATGTGTCCTGCAATGAGCATGGGAATGATCATAGTTGAGCTTTCACTAGCTAATCTTCTTCATTCATTTGATTGGGAGCTGCCACCTAAATTTGACAAGGAAGAGATGTTGGACACGCAAGCAAAACCCGGAATAACAATGCACAAAAAAATTGATCTTTATCTTATTGCTAAGAGACAAACTAGTCCACGCAAGATTTTTTTGTAG 1554 0.4035 MGCLFLLSLLSIAILFIIHKYRTYGTRATLPPGPPTLPLIGNIHQLDSSSLHRCLWKLSKRYGPLMILHLGSVPCLVVSSAKMAKEVLKTHDLKFASRPPFLGMRKLSYNGLDLGFAPYGPYWREMKKLCALHLFSSQRLQSFSNIRENEVSQMIQKIAKYDSSEKAVNLTETLMSFTNSLICRIAFGRKYGYDYEEELEIGNDQKKSRLQVLLNEAQALLTEFYFSDHFPLMGWVDRLRGTLRRLDKTFKELDLIYERVIHDHMNPTRPQTNDQEVPYIIDILVQMMNHHSFSFDLTPDHIKAILMNIFIAGTDTSSAIVVWAMTALLKNARVMSKVQREIRDLFGDKDFISEDDIERLPYLKAIVKETLRLFPPSPLLLPRETMERCNIDGYEIPARTLVHVNAWAIARDPESWEDPEEFYPERFIGSSIDFKGRDFELIPFGAGRRMCPAMSMGMIIVELSLANLLHSFDWELPPKFDKEEMLDTQAKPGITMHKKIDLYLIAKRQTSPRKIFL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3301 517 PANTHER CYTOCHROME P450 71B11-RELATED 8 508 - -
Lja5g3301 517 PANTHER CYTOCHROME P450 83B1 8 508 - -
Lja5g3301 517 Pfam Cytochrome P450 31 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 SUPERFAMILY Cytochrome P450 31 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 Coils Coil 203 223 - -
Lja5g3301 517 Gene3D Cytochrome P450 25 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Lja5g3301 517 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3301 517 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3301 Lja-Chr5 63953989 63956402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3301 4 504 Cytochrome P450 AT4G31500 45.635 3.06e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3301 - - gmx:606704 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3301 5 63953989 63956402 Lja5g3301 5 63953989 63956402 ECH