Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3296 ATGTTAGTGACTATTGTTTTGGTTTGTTTTGCTAATAGAGTTCTTGATGTAGCAACTGCTGATGCAACATATCCGGCATTGTTTGCATTTGGAGACTCAATTCTTGATACAGGAAATAACAACCACCTTTTTTCACTTGTTAAGTGCAATTTTGCTCCCTATGGAAGAGACCTGCCAAATCAAGAACCTACAGGAAGATTCTGCAATGGGAAAATTCCCACAGATATTATAGCGTCACATCTAGGAATCAAACAATTGGTGCCAGCATATTTATCTGGCGATTTAGGGGTTGATGAACTTAGCACCGGTGTAAGCTTTGCTTCAGGTGGCTCAGGGAATGATGATCTTACAGCTCAAATGCAGTTTGTTTTAACGTTATCGGCGCAAATGAAAAATTTTGAAGAGTACATACAAAGTCTGAATACCGCGGTTGGAGAACAAAAAGCAGCTTCCATCATATCCAATGGCTTGTATTTGTTTTCATCAGGGAACAATGACATTGCCCTTACCCACACTTTGAACATAGCAAGGAGCTTAATATTATTCCCTATCTATGCCGATATGATAGTTGGATGGGCTTCAAATTTCCTCGATGATCTATACAGTCACGGAGCACGACATGTGTGGGTTCTAAGCACATTGCCGTTGGGATGCTTGCCCGGACCTAGAGCTCTAGCGGGTATATTGTTTTGTCAACAATATCTCAATGATCAAGCACAAACATTCAATACCAAGTTAGAAGCAGAGGTTTCTTCTTTGAAAACCAAGCATCCTGATTTCGACATTAGGTTCATTGATGTCTATAATCCTATGCTTAATCTTATACAAAATCCTTCTAGTGCAGGGTTTGTAAACGTGGCAACCGGGTGCTGTGGGTCAATTTTTTCTGGAGGGCTATGCAATCTCATTAGTGGCTCTTGCCAAGATCCTACTAACCACTTTTTTTGGGATTCTGCCCATCCGACCCAAGCAGGTTATGAGCACAGTCTCGCTCCTATACTACAAGCAATGAATATTTCCTCGATCGTCTCATAA 1035 0.4097 MLVTIVLVCFANRVLDVATADATYPALFAFGDSILDTGNNNHLFSLVKCNFAPYGRDLPNQEPTGRFCNGKIPTDIIASHLGIKQLVPAYLSGDLGVDELSTGVSFASGGSGNDDLTAQMQFVLTLSAQMKNFEEYIQSLNTAVGEQKAASIISNGLYLFSSGNNDIALTHTLNIARSLILFPIYADMIVGWASNFLDDLYSHGARHVWVLSTLPLGCLPGPRALAGILFCQQYLNDQAQTFNTKLEAEVSSLKTKHPDFDIRFIDVYNPMLNLIQNPSSAGFVNVATGCCGSIFSGGLCNLISGSCQDPTNHFFWDSAHPTQAGYEHSLAPILQAMNISSIVS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3296 344 CDD SGNH_plant_lipase_like 25 328 IPR035669 -
Lja5g3296 344 Gene3D SGNH hydrolase 13 341 IPR036514 -
Lja5g3296 344 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 340 - -
Lja5g3296 344 PANTHER GDSL ESTERASE/LIPASE EXL3 4 340 - -
Lja5g3296 344 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 27 38 IPR008265 GO:0006629|GO:0016298
Lja5g3296 344 Pfam GDSL-like Lipase/Acylhydrolase 27 328 IPR001087 GO:0016788
Lja5g3296 344 SUPERFAMILY SGNH hydrolase 27 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3296 Lja-Chr5 63919806 63921407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3296 3 335 Pollen Coat Proteome AT1G75910 36.873 1.06e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3296 - - aip:107646231 367.081