Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3271 ATGGCCTCATCCAGTGGAAACTCCAGCATTTCCACTAAGTTTCATAGCTCTGGCTCTGAAGAAGATTTGCAGCTTCTGATGGACCAGAGAAAGAGGAAGAGGAAGCAATCAAATTGCGAATCAGCGAGGAGATCTCGAATGCGAAAGCAGAAGCACTTTGATGATCTCAATGTCCAAGTGGAGAGGCTCACAAAGGAAAACAGTGAAATCCTCAATAGGGTGAATCTCATCACACAGCACTATGTGAATGTTGAGGCAGAGAATTGCATTTTGAGGGCCCAGATGGGTGAGCTTAGCCAAAGGCTTCAATCACTGAATGCTATCATCAGCCTCATCAACACAACCACTACAACTGGAATATGCCAAAATGATTGCTTTCTAACAATTGCTGATAACTTCATGAACCCCATGAACATGCACTATCTTAACCAACCAATTGTGGCCTCTGCAGAAGTTTTTCAGTGGTGA 468 0.438 MASSSGNSSISTKFHSSGSEEDLQLLMDQRKRKRKQSNCESARRSRMRKQKHFDDLNVQVERLTKENSEILNRVNLITQHYVNVEAENCILRAQMGELSQRLQSLNAIISLINTTTTTGICQNDCFLTIADNFMNPMNMHYLNQPIVASAEVFQW* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3271 155 Coils Coil 53 73 - -
Lja5g3271 155 PANTHER BZIP TRANSCRIPTION FACTOR 1 153 - -
Lja5g3271 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Lja5g3271 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 87 IPR004827 GO:0003700|GO:0006355
Lja5g3271 155 MobiDBLite consensus disorder prediction 24 53 - -
Lja5g3271 155 MobiDBLite consensus disorder prediction 1 23 - -
Lja5g3271 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 153 - -
Lja5g3271 155 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Lja5g3271 155 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Lja5g3271 155 MobiDBLite consensus disorder prediction 1 53 - -
Lja5g3271 155 Gene3D - 28 83 - -
Lja5g3271 155 Pfam bZIP transcription factor 30 85 IPR004827 GO:0003700|GO:0006355
Lja5g3271 155 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3271 Lja-Chr5 63154568 63155986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3271 26 155 bZIP Transcription Factor Family AT4G34590 52.555 1.59e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja5g3271 bZIP_1 6.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3271 K25786 - rcu:8275772 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3271 5 63154568 63155986 Lja5g3271 5 63154568 63155986 ECH