Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3257 ATGGGTTCGGCAGCCAAAACAGTTTGCGTTACAGGGAGTACCGGTTTCATCGGGTCATGGCTTGTCATGAGACTCATGGAGCGCGGCTATATGGTTCGAGCCACCGTACAACGCGACCCAGATAACATGAAGAAGGTGAAGCATTTGCTGGAACTGCCTGGTGCAAAGACCAACCTGACTATATGGAATGCCGATCTTACTGAAGAGGGAAGCTTTGATGAAGCCATCAAAGGGTGCTCCGGAGTTTTCCATGTGGCCAGCCCCATGGACTTCAATTCCAAGGATCCGGAGAATGAAGTGATCAAGCCTGCCATAAATGGAGTACTAGACATCATGAAAGCATGTCTCAAGGCCAAAACTGTTCGCAGGTTGGTTTTCACATCATCAGCCGGCATCCTTAGTGTTTCAGAACGCCATAAGCATATGTTGGATGAGACCTGCTGGGGTGACCTTGAGTTCTGCAAGAAAGTAAAGATGACTGGCTGGATGTATTTTGTTTCAAAAGAACTAGCGGAGCAAGAAGCGTTGAAATTTGCGAAAGAAAACAACATAGACTTCGTCTCAATCATCCCATCCCTTGTTGTTGGCCCCTTTCTAATGCCCACAATGCCACCTAGTCTATATACCGCTCTTTGTCCTATCACCGGAAACGAGGCCCATTATATGATTATGAAGCAAAGCCAATTCGTCCATGTGGATGATCTTTGTCTTGCTCATATTTTCCTCTTCGAGCACCCTGAATCAGAAGGGAGGTATATGTGCAGTGCATGTGATGCTAATATCCATGACATTGCAAAATTAATTAACACAAAATATCCTGAGTACAATGTTCCCACTAAGTTCAAGAATATTCCAGATGAATTGGAGCTTGTCAGATTTTCATCAAAGAAGATCAAAGACATGGGGTTCCAATTTAAATACACCTTAGAGGATATGTACACTGGAGCAATCGACGCGTGCAGAGAAAAAGGGCTTCTTCCTAAAGCTGCAGAGACTCCAAGCAATGGCATAATGGAGAAATAA 1023 0.4457 MGSAAKTVCVTGSTGFIGSWLVMRLMERGYMVRATVQRDPDNMKKVKHLLELPGAKTNLTIWNADLTEEGSFDEAIKGCSGVFHVASPMDFNSKDPENEVIKPAINGVLDIMKACLKAKTVRRLVFTSSAGILSVSERHKHMLDETCWGDLEFCKKVKMTGWMYFVSKELAEQEALKFAKENNIDFVSIIPSLVVGPFLMPTMPPSLYTALCPITGNEAHYMIMKQSQFVHVDDLCLAHIFLFEHPESEGRYMCSACDANIHDIAKLINTKYPEYNVPTKFKNIPDELELVRFSSKKIKDMGFQFKYTLEDMYTGAIDACREKGLLPKAAETPSNGIMEK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3257 340 Pfam NAD dependent epimerase/dehydratase family 8 249 IPR001509 -
Lja5g3257 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 321 IPR036291 -
Lja5g3257 340 CDD FR_SDR_e 8 303 - -
Lja5g3257 340 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 331 - -
Lja5g3257 340 Gene3D - 1 338 - -
Lja5g3257 340 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3257 Lja-Chr5 62928774 62934092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3257 3 319 Miscellaneous Gene Families AT4G27250 38.369 5.41e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3257 K13082 - gmx:548087 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3257 5 62928774 62934092 Lja5g3257 5 62928774 62934092 ECH