Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3246 ATGATGATGACCAAAAACGGTGCTACAACTTTGCAGATTACAATTCCAAGCTATTGTGAAGTTAAGGTATACCGATCATTATGCATAGAGCTTCATGGATTCATTGGTAGAATTTTGCACTTATTATTGGATATCGAATCTGCCAGACCAAATTGTGCTTTAGCAATGCAGGCATTGTGCTCATTGCACTTCACTTTGGATAAAGCCAAGTCAGTCATCAAACATTGTTCTGAGTCAAGTCAACTCTACCTGGTAATCACATCAAACAAGATACTTTCAAGATGTGAAAAAATAAGAAGTGCTTTTGAGTTGTACTTGGCTCAGATTCAAAATGCAGTTCCAATACCATTGGCTGCTGAGATATCTGCAATACTTCGTGATCTGAGGGACACAGAATTTTCCCTGGAATTTGCAGAAGAAGAGGCTAGGAAAGTAGTGTTGTCCATGTTTGAGAAGAATTTTCCTGATTCAGTGTCTATGGAGAATGCAGAACTTGAAGCTATTCAAATTGCAACTTTGAGGTTGAATATCAAATCTTCATCCCATCTCTTAGTAGAGAAAGCAACTCTTAAGAGGCAACTTAAAAATGTCAATGGCACAAACCAAAAGGAGAAGGAACTTCTAGAATACCTTTTGTATTTGTTGATCAAATATGAGAAACTCATTTGCCAGGTTCAAAATGGAAGCCAAACCAGTCCTTGA 702 0.3761 MMMTKNGATTLQITIPSYCEVKVYRSLCIELHGFIGRILHLLLDIESARPNCALAMQALCSLHFTLDKAKSVIKHCSESSQLYLVITSNKILSRCEKIRSAFELYLAQIQNAVPIPLAAEISAILRDLRDTEFSLEFAEEEARKVVLSMFEKNFPDSVSMENAELEAIQIATLRLNIKSSSHLLVEKATLKRQLKNVNGTNQKEKELLEYLLYLLIKYEKLICQVQNGSQTSP* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3246 233 Gene3D - 10 113 IPR036537 GO:0007166
Lja5g3246 233 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 27 229 - -
Lja5g3246 233 PANTHER U BOX DOMAIN-CONTAINING 27 229 - -
Lja5g3246 233 Coils Coil 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3246 Lja-Chr5 62784547 62786909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3246 22 191 U-box Gene Family AT4G36550 38.235 3.44e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3246 - - ccaj:109811990 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3246 5 62784547 62786909 Lja5g3246 5 62784547 62786909 ECH