Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3227 ATGGCTAAAAGCTTTAAGCTCAAATTCAAGATCCCTTCATTTCAATTGTGTTGTTCAAAACACCATCATCCCACAGTTCCTTCCATACATCGTCTTTCTCCTATGAATCCCAAAGCATGTGATGTTGGGTACCCAAAAAACCCACCTGCTCCACCACCTTCAACACCTGAATACCAGTGCATAGTTTCACCAAAAATCACTGCTATAGCAATGTTTTCCAATTCTCCTGACATCGTTCACTGTGAAATTGAATCCACCTTTTGCAAAATGGGCCTCAAAGCCAGAGTCCAAAAAACAAAAACAGCCATGGCAAGTGTTTTATCAAGGAGTGCAACAAGAAGTGATTCTTTTGTTCATAAACTCAACAATTATATTGAAGAAGAAGATAGTGAGTCTCTACTTTCATTCTCCGCGAGTTTCAGTGACGAGTTTTACCATGAACCGAGTGATGAAATGGCCCATTCTCCTTACAAGAGCCAGAGGAAAACAGAGGAAAAGGTTGTCAGCAAAACAGAGAAACAGGGGAAGAATAGCAAAAGCAACATAGGGAAGGTTCAAAAACTGAATTTTCTTCATGATTCAGAGATGGAAGAGGAGAAAGATGAGAAGAAGAAAGGGATGGTGAGAAGGGCATCATCAATGGCAGAGGGGTGCGACGCGGTGGCGGAGGGAATGGTGATGAATGAGAGCTTTGCAGTGGTGAAAAGGTCGAATGATCCGTACGAGGATTTCAGGAGGTCAATGGTGGAGATGATAATGGAGATGGAGATGACACAAGCTGAGGATTTGGAGAGGCTTTTGCAGTGTTTTCTGGCTCTGAACTCACGGTGTTATCATGGAGTAATAGTGAAAGTTTTCATGGAGATTTGGCAACAACTGTTTTCTGAAACATCATGCTTCCAACAAAAAATCTTAGAATAA 921 0.4169 MAKSFKLKFKIPSFQLCCSKHHHPTVPSIHRLSPMNPKACDVGYPKNPPAPPPSTPEYQCIVSPKITAIAMFSNSPDIVHCEIESTFCKMGLKARVQKTKTAMASVLSRSATRSDSFVHKLNNYIEEEDSESLLSFSASFSDEFYHEPSDEMAHSPYKSQRKTEEKVVSKTEKQGKNSKSNIGKVQKLNFLHDSEMEEEKDEKKKGMVRRASSMAEGCDAVAEGMVMNESFAVVKRSNDPYEDFRRSMVEMIMEMEMTQAEDLERLLQCFLALNSRCYHGVIVKVFMEIWQQLFSETSCFQQKILE* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3227 306 MobiDBLite consensus disorder prediction 148 179 - -
Lja5g3227 306 MobiDBLite consensus disorder prediction 148 173 - -
Lja5g3227 306 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 231 294 IPR006458 -
Lja5g3227 306 Pfam Transcriptional repressor, ovate 237 294 IPR006458 -
Lja5g3227 306 ProSiteProfiles OVATE domain profile. 233 292 IPR006458 -
Lja5g3227 306 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 108 296 IPR038933 GO:0045892
Lja5g3227 306 PANTHER TRANSCRIPTION REPRESSOR OFP7 108 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3227 Lja-Chr5 62415884 62417178 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja5g3227 Ovate 1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3227 - - lja:Lj0g3v0201269.1 368.622