Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3161 ATGGAAGAAAAGGAGCACTCAACCAACCTCATAGCTCACGATTTCCCCGGCCTCATCCGCGTCTTCACCGACGGCACAATCCACAGGCTCACCGCCACCGACGTCGTCCCACCCTCCACCGACCCCCACTCCGTCGTTTCATCCAAAGATATCACCCTCCACACCCACTCCAACATTATCCCCGCCCGTCTCTACCTTCCCACCGCCACCACCACCACCACCCTCCCCCTCCTCATCTACTTCCACGACGGCGGCTTCTGCTGCTCCTCCCCCTTCGCCACCACCTACCACAACTACCTCACCACCGTCGTCGCCGAAGCCAAAGTCCTCGCCGTCTCTGTCAGCTACCGCTTAGCGCCGGAGCACCCTCTCCCCGCCGCCTACGAGGATTCCTGGGCCACGCTCCAATGGGTCGCGTCCCACCGTAGCAACAATGGACTTGAGCCTTGGTTGAACAACCATGCAGATTTTTCTCGAGTCTTCTTGGCCAGAGACAACGCCGGCGCGAACATAGCTCACAACTTGGCCATGTTCGCTGGGGATTCCGATTCGGGGCTTGAAATGGATCATCAACTCGGTTAA 582 0.5928 MEEKEHSTNLIAHDFPGLIRVFTDGTIHRLTATDVVPPSTDPHSVVSSKDITLHTHSNIIPARLYLPTATTTTTLPLLIYFHDGGFCCSSPFATTYHNYLTTVVAEAKVLAVSVSYRLAPEHPLPAAYEDSWATLQWVASHRSNNGLEPWLNNHADFSRVFLARDNAGANIAHNLAMFAGDSDSGLEMDHQLG* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3161 193 SUPERFAMILY alpha/beta-Hydrolases 8 182 IPR029058 -
Lja5g3161 193 PANTHER ARYLACETAMIDE DEACETYLASE 11 181 - -
Lja5g3161 193 Gene3D alpha/beta hydrolase 18 191 IPR029058 -
Lja5g3161 193 Pfam alpha/beta hydrolase fold 78 183 IPR013094 GO:0016787
Lja5g3161 193 PANTHER CARBOXYLESTERASE 2-RELATED 11 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3161 Lja-Chr5 61487359 61487940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3161 11 180 Carbohydrate Esterase AT1G49660 49.425 1.84e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3161 - - gmx:100817797 250.366