Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3140 ATGGATGGAACATTCGCTTACATTATTATCCTGTTTCTCATTACTTTATTTTCATTCTTGTTCTTCTTACCAAACCGAAATAGAAGACCCCAGAACAAGACAACAACAAGTGCAAAGCTTCCTCCAGGTTCAATGGGGTGGCCGTACATAGGACAGACCTTCCAACTCTACTCCCAAGACCCAAATGTTTTCTTTTTCACCAAACAGAAAAGGTATGGTGAAATATTCAAGACCAACATTCTTGGTTGTCCCTGTGTGATGCTTGCAAGCCCTGAGGCTGCAAGGTTTGTGCTGGTGACACAAGCTCACTTGTTTAAGCCAGCATACCCCAAAAGCAAGGAACGTTTGATAGGTCCGTGTGCTCTGTTTTTCCACCAAGGAGACTACCACATGAGTTTAAGGAAACTAGTTCAGAAGTCTTTGTCACTCCAAACACTCCGCAACTTGGTGCCTGAGATTGAAGCCTTAGCCTTATCTTCCATGGAATCTTGGGGTGATGGACGTGTCATTAACACCTTCAAGGAAATGAAAAGGTTTTCATTTGAAGTTGGAATCCTCACAATTTTTGGATATCTAGAGCCACGGTTGAGGGAAGAGCTCAAGAAGAACTACTGGATTGTGGACACTGGCTACAATTCCTTCCCAACTTACATCCCTGGAACTCAATACAAAAAGGCACTCTTGGCAAGAAAGAGACTTGGCAAGATTCTAAGTGAAATAATATGTGAGAGGAGGGAGAAGAAGCTGCTTGAGAGAGATCTCTTGAGCTGCTTGCTGAACTGGAAAGGTGAAGGAGGAGAAACCTTATCTGATGACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCGGGACACCACAGCTAGTGTCATCACATGGGTGGTAAAGTACCTGCACGATGAACCGAAACTTCTGGAGGCTGTAAAGGCAGAGCAGAAGGCCATTTACAAGGAAAGTGAAGGTACCCAACCATTGACTTGGAATCAAACTAGAAATATGCCAATTACCTACAAGGTTGTGTTAGAGAGCTTGAGAATGTCAAGCATTATATCTTTTCTTTTTAGAGAAGCAGTAGCTGATGTAGAGTACAAGGGGTTCCTAATACCAAAAGGGTGGAAAGCAATGCCTCTGTTCAGGAATATTCATCACAATCCAGAATTTTTTCCAGAGGCTCATAAATTCAACCCTTCAAGGTTTGAGGTGGCACCAAAACCCAACACTTTCATGCCATTTGGTAGTGGAGTACATGCATGCCCCGGCAATGAGCTTGCTAAGATGGAGACGTTGATAATGATCCATCATTTGGTGACCAAGTTTAGGTGGGAAGTTGTAGGATCTCAGTGTGGGATTCAGTATGGCCCATTTCCAGTGCCACTCAATGGACTCCAAGCTAGATGTTGGAGAGAATCTACCAGCACCTAG 1428 0.4356 MDGTFAYIIILFLITLFSFLFFLPNRNRRPQNKTTTSAKLPPGSMGWPYIGQTFQLYSQDPNVFFFTKQKRYGEIFKTNILGCPCVMLASPEAARFVLVTQAHLFKPAYPKSKERLIGPCALFFHQGDYHMSLRKLVQKSLSLQTLRNLVPEIEALALSSMESWGDGRVINTFKEMKRFSFEVGILTIFGYLEPRLREELKKNYWIVDTGYNSFPTYIPGTQYKKALLARKRLGKILSEIICERREKKLLERDLLSCLLNWKGEGGETLSDDQIADNIIGVLFAARDTTASVITWVVKYLHDEPKLLEAVKAEQKAIYKESEGTQPLTWNQTRNMPITYKVVLESLRMSSIISFLFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEAHKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKMETLIMIHHLVTKFRWEVVGSQCGIQYGPFPVPLNGLQARCWRESTST* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3140 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Lja5g3140 475 Gene3D Cytochrome P450 30 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 Pfam Cytochrome P450 41 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 SUPERFAMILY Cytochrome P450 37 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PANTHER CYTOCHROME P450 26 11 469 - -
Lja5g3140 475 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 469 - -
Lja5g3140 475 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g3140 475 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3140 Lja-Chr5 61165446 61169773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3140 10 472 Cytochrome P450 AT3G19270 67.672 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3140 K09843 - gmx:100815135 807.749