Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3017 ATGTTGAGAGGAACAGTGTCGGTGCCTGTTGTGCTCCTTCTCTTCCACTCTCTTCTTCTTCTGCTGCTGCTGTTGCTACCTTCTTCCTCGCTCGCTATCAGACCCACCGAGTTCGATCGGGTTGAACTCGCCAACGCCACCGAGTCCAATGTCTCGCTCTCTAGACCCAGCAGCTTCGCCGACATGATTGATCGAGCTCTCGAGCACGAGTTCACCGAGAACGACCAGAACGAAGCAGCTGATGCGGGAAGCTTCAACAATAGTGTAGCAGAACAACAGGCTGTTCTGGAAACTGTGGCCAGAGTCAAGCAAAACAAGAATGACACAAAAGATGAGCATTCATTTCACCATGCATTTAATAGAGGTGAGGAAACCCCAATGTTGATAGATCGAAAGGACAATGTCTTTATCATTTCTAACTTCAAATCCAAGTATCCGGTGCTGCAGCTAGACTTACGGTTGATTTCAGACCTGGTAGTTGCTATTGTTTCGGCAACTTGTGGCGGTGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACTGGATATCTTCTAGCTGGCTCCATAATTGGACCTGGTGGTTTTAACTTCATCAGCGAAATGGTGCAGGTTGAAACAGTGGCTCAATTTGGTGTAATATTTCTTCTGTTTGCATTGGGCCTGGAGTTCTCTATGACAAAGCTTCGAGTTGTTCGATATGTTGCTGTTCTTGGAGGCCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGAGTTACTGTATCGTTATGTGGTGGTAAAGCTTCAGAAGGGGTTTTTGTTGGTGCTTTCCTTTCTATTTCATCAACAGCAGTGGTATTGAAGTTTTTGATGGAAAAGAACACTACTAATGCCCTTCATGGACAGGTCACGATTGGGACCCTTATTTTGCAGGATTGTACTGTTGGATTGCTTTTTGCACTGCTTCCAGTTCTAGGTGGCACCTCAGGTGTTTTTCAAGGAGTTTTATCAATGGCAAAGTTGTTGGTGACACTGATTGCATTCCTTTCTGTTCTGTCAATATTATCTCGCACCTGCCTTCCGTGGTTTCTTAAACTGATGATAAGCCTATCATCACAGACCAATGAGCTCTATCAATTGGCGTCAGTTGCATTCTGCTTGCTTGTAGCCTGGAGTAGTGATAAGCTGGGACTGAGTCTAGAGCTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATCATGCTCACCATACTCTAGAGCAAGTTGAACCTATTTGCAATTTTTTTGCTGCTCTTTTTCTAGCGAGCATTGGAATGCTGATTCATGTTCATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCTGTTATATTGGTGGTAGTTATAAAAACTATCATAATTGCTTCTGTGGTGAAAGGATTTGGATACAATAACAAGACTTCAGTACTTGTTGGAATGTCAATGGCACAGATTGGAGAATTTGCTTTTGTGCTTCTAAGCCGTGCTTCTAATTTTCATCTAGTTGAGGGTAAACTCTATCTTCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACAACTCCTATACTTTTCAAGCTAATTCCTGCTGTAGTGCATCTTGGTGTGCTATTGAGATGGTTCTCTCCTGACAGCTCGGTGGAGATTGCATATAAGGTAGATAACCTCCGCTCAGAGAGCGGTAAGCTGCGGATAATTTTGATGGACCAAGAATCTCATGATTCGTAA 1734 0.4366 MLRGTVSVPVVLLLFHSLLLLLLLLLPSSSLAIRPTEFDRVELANATESNVSLSRPSSFADMIDRALEHEFTENDQNEAADAGSFNNSVAEQQAVLETVARVKQNKNDTKDEHSFHHAFNRGEETPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIIGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSMTKLRVVRYVAVLGGLLQIFLFMCMCGVTVSLCGGKASEGVFVGAFLSISSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCTVGLLFALLPVLGGTSGVFQGVLSMAKLLVTLIAFLSVLSILSRTCLPWFLKLMISLSSQTNELYQLASVAFCLLVAWSSDKLGLSLELGSFAAGVMIATTDHAHHTLEQVEPICNFFAALFLASIGMLIHVHFLWNHVDILVASVILVVVIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNFHLVEGKLYLLLLGTTALSLVTTPILFKLIPAVVHLGVLLRWFSPDSSVEIAYKVDNLRSESGKLRIILMDQESHDS* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3017 577 Pfam Sodium/hydrogen exchanger family 159 528 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja5g3017 577 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 12 577 IPR045158 GO:0015386|GO:0071805|GO:1902600
Lja5g3017 577 Gene3D - 152 535 IPR038770 -
Lja5g3017 577 PANTHER K(+) EFFLUX ANTIPORTER 6 12 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3017 Lja-Chr5 59099772 59109104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3017 48 577 Antiporters AT2G19600 80.074 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3017 - - gmx:100811030 955.281