Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2996 ATGTTTCTATTCGAGGATCTCTGGCTATTGCAACGCCTCGACCATGCCGTCGCAAAATCTCGTCTCTTTTCAGAATCAATTTTGGAATCTGTACATGATTTCACGACGAACCCTAGCTGCGAAGGAAGCGAATCAGATGCGTGTCGTGACGAGTCAACGGCTTTGGCGCTGAAATTCGTGGCCATGGCGGCGATTCTGGTGGCGGGATTCGCGGGAATTTTGATTCCGTTGGTCGGGAAGCACCGGCGGCTTCTGCGCCGTGACGGGGAGGTTGTTGCGGCGGCGAAGGCGTTTGCGGCGGGGGTGATTCTCGCGACGGGGTTCGTTCACATGTTGACGGACTCGTGGGAGGCGCTGAACCACCCTTGTCTACGGCGGTACACGTGGACGCGGTTTCCGTTTACGGGATTCTTCGCGATGCTGGCGGCGTTGCTTACTCTGTTGGTTGATTTTGTGGCGACTCAGTATTATGAGCGGCGGCAGGGTGGTGGTGGTGAGGGGCGGGGGAGGGTGGTTGACGGTGGCGGTGACGCTGAGGAGGAGGAGGAGGAGGGGATTGTGGAGGTGGTTAGGGAAGAGGGAATGCACGTTGTGGGGGTGCATGCTCACGCGGCGCACCATGGACATTCCCATTTGTGCCACGGTGGCGAAAAGGAAACGCACAGTGGGGGCCACGTTCACTCTCACTCGTTCGGAGGTGGTGATGACGTGGATTCTAGCGTCCGCCACGTCGTCGTTTCACAGGTTTTGGAACTTGGGATTGTATCACACTCCATAATAATTGGGCTATCCCTAGGTGTTTCTCAAAGCCCATGTACCATGAGGCCCCTAATTGCAGCACTATCCTTCCACCAATTCTTTGAAGGTTTTGCACTCGGTGGGTGCATCTCCGAAGCCCAATTCAAGACATTATCAGCAACCATAATGGCTTGTTTTTTTGGACTCACAACGCCATTGGGTGTTGCCATTGGAACCGCTATTTCCTCTAATTTTAACCCTCATAGTCCTGGAGCACTCATCACAGAAGGCATCTTGGACGCGTTCTCAGCTGGGATCTTAGTGTACATGGCTCTGGTGGATTTAATAGCTGCGGATTTTCTTAGCAAGAGAATGCGTTGTGACTTTAGGCTGCAGATAGTTTCATACTGTTTGCTTTTCCTTGGAGCTGGATCGATGTCTTCACTAGCAATGTGGGCATGA 1200 0.5333 MFLFEDLWLLQRLDHAVAKSRLFSESILESVHDFTTNPSCEGSESDACRDESTALALKFVAMAAILVAGFAGILIPLVGKHRRLLRRDGEVVAAAKAFAAGVILATGFVHMLTDSWEALNHPCLRRYTWTRFPFTGFFAMLAALLTLLVDFVATQYYERRQGGGGEGRGRVVDGGGDAEEEEEEGIVEVVREEGMHVVGVHAHAAHHGHSHLCHGGEKETHSGGHVHSHSFGGGDDVDSSVRHVVVSQVLELGIVSHSIIIGLSLGVSQSPCTMRPLIAALSFHQFFEGFALGGCISEAQFKTLSATIMACFFGLTTPLGVAIGTAISSNFNPHSPGALITEGILDAFSAGILVYMALVDLIAADFLSKRMRCDFRLQIVSYCLLFLGAGSMSSLAMWA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2996 399 Pfam ZIP Zinc transporter 56 396 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja5g2996 399 TIGRFAM zip: ZIP zinc/iron transport family 40 399 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lja5g2996 399 PANTHER ZINC/IRON TRANSPORTER 36 399 - -
Lja5g2996 399 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 36 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2996 Lja-Chr5 58756390 58762569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2996 35 399 Inorganic Solute Cotransporters AT1G10970 64.550 1.09e-154 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2996 K14709 - gmx:100812212 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2996 5 58756390 58762569 Lja1g4041 1 51199827 51202543 PCT