Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2983 ATGGTGTCTATGGAATTGCAATGGTTGTCTTCTATTCCAAGTTTCCCTTTGGTTTCTGCAATATTCACCCTGCTAGCGTTATTTGGCTATCTATATGGGCCCTATTGGGGTGTAAGGAAAGTTCCAGGCCCACCAACTCTGCCGCTGGTAGGACACCTTCCTTTGCTAGCTAAGTATGGTCCTGATGTGTTCTCAATTCTCGCCAAACAATATGGGCCAATCTACAGATTTCACATGGGAAGACAACCACTAATAATTGTAGCAGATGCAGAGCTATGTAAAGAGGTAGGAATCAAGAAATTCAAAGACATCCCAAACAGAAGCATTCCCTCACCTATTTCTGCCTCTCCACTTCATAAAAAAGGTCTATTCTTCACCAGGGACTCAAGATGGTCAACCATGAGAAACACCATATTATCAGTATACCAACCATCACGCTTAGCCAACTTAGTCCCCACAATGCAATCATTCATAGAATCTGCAACACAAAATCTGGATGACATTGACACCTCAAAAGAAGACACAATAATCTTCTCCAATCTTTCTCTTAGGCTAGCAACTGATGTGATTGGAGATGCAGCATTTGGAGTGAACTTTGGCTTCTCAACAAAGCCTCACTCATCTTGTGAATCAATCAACACTAGTGTTGACAACATGGTTTCAAATTGCGGTACGCAATTGCGGCCGCATCAATCTGTATTTATCAACAATTCTGGGATGCAGCGGCAACCACAATTTAAAACCCCAGTAAACAACAATGCAGCAGGTGCTGCTACTGATGATGATGATGAAGTTTCAGATTTCATCAATCAACACATTTACTCCACCACACAGCTTAAAATGGACTTGTCTGGTTCCTTCTCCATCATTCTTGGTTTAATTGCTCCAATACTTCAAGAGCCATTCAGGCAGATTCTGAAGAGAGTTCCAGGTACCATGGACTGGAAAATTGAGCAAACTAATCGAAAATTGAGTGGTCGTCTCGATGAGATTGTGAAGAAGAGGATGGAGGATCGGAACCGGAGTTCGAAGAATTTCTTGTCACTCATTCTGAATGCAAGGGAATCAAAGACTGTTTCAGAAAATGTGTTTTCACCTGATTACATTAGTGCTGTTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACATCTTTTACATTATCATCAATTGTTTATTTGGTTGCTGGGCATCCAGAAGTTGAGGAAAAGGTGATTCATGAGATTGATGAGTTTGGTCCTCATGATAGGATACCAACTGCTCAGGATCTTCATGACAGTTTTTCTTATCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACACTGTCTCCCCACTGGTTGCAAGAGAAACATCAAATGAAGTAGAGATAGGGGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCACTTGGAGTTCTGGCAAAAGACACAAGGAACTTTGCAGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGATCCCAAATGTGAAGAAATGAAACGAAGGCACCCTTATGCATTCATACCATTTGGAATAGGTCCCCGGGCATGTATTGGTCAGAAATTTTCTCTGCAAGAGATCAAGCTCACTCTTATTCATTTGTACCGAAAATATGTGTTTCGTCATCCACTTAACATGGAGAAACCTGTAGAACTGGAATATGGTATGGTTCTCAACTTCAAGCACGGTGTCAAGCTTAGAGTCATAAAAAGAACATAG 1725 0.4157 MVSMELQWLSSIPSFPLVSAIFTLLALFGYLYGPYWGVRKVPGPPTLPLVGHLPLLAKYGPDVFSILAKQYGPIYRFHMGRQPLIIVADAELCKEVGIKKFKDIPNRSIPSPISASPLHKKGLFFTRDSRWSTMRNTILSVYQPSRLANLVPTMQSFIESATQNLDDIDTSKEDTIIFSNLSLRLATDVIGDAAFGVNFGFSTKPHSSCESINTSVDNMVSNCGTQLRPHQSVFINNSGMQRQPQFKTPVNNNAAGAATDDDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLIAPILQEPFRQILKRVPGTMDWKIEQTNRKLSGRLDEIVKKRMEDRNRSSKNFLSLILNARESKTVSENVFSPDYISAVTYEHLLAGSATTSFTLSSIVYLVAGHPEVEEKVIHEIDEFGPHDRIPTAQDLHDSFSYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDTRNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYVFRHPLNMEKPVELEYGMVLNFKHGVKLRVIKRT* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2983 574 PANTHER THROMBOXANE-A SYNTHASE 14 237 - -
Lja5g2983 574 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS P450 superfamily signature 519 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS P450 superfamily signature 379 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PANTHER CYTOCHROME P450 FAMILY PROTEIN 251 574 - -
Lja5g2983 574 Pfam Cytochrome P450 301 556 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 Pfam Cytochrome P450 42 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 SUPERFAMILY Cytochrome P450 35 573 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
Lja5g2983 574 PANTHER THROMBOXANE-A SYNTHASE 251 574 - -
Lja5g2983 574 Gene3D Cytochrome P450 31 574 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 237 - -
Lja5g2983 574 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS E-class P450 group I signature 472 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS E-class P450 group I signature 432 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS E-class P450 group I signature 368 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2983 574 PRINTS E-class P450 group I signature 388 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2983 Lja-Chr5 58537160 58544857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2983 79 573 Cytochrome P450 AT2G26170 66.667 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2983 K20771 - gmx:100805689 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2983 5 58537160 58544857 Lja1g4031 1 51069177 51074172 PCT