Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2982 ATGGGTGCATCTGGCAAATGGGTCAAAGCATTAATCGGTTTCAAGAAGCCAGACAACAACGTTGAAGGTGGTGGGAAGAGCAACAAAAAGTGGAAGCTGTGGAAGAGTTTTTCAGGTTCAGGGGACAAAATTGGAGGAGGTTTCAGGTCTGACTCTGAAGAAGGCTCTCAATATTCCCCGCGAGTGCCGCCGTCTGATGCTTTCACCGCGGCTGTGGCCACCGTGGTTCGAGCTCCCCCGAAGGATTTCAAACTCCTCCGGCTCGAATGGGCCGCCACCAGAATTCAAACCGCTTTCCGTGCCTTTTTGGCAAGAAGGGCACTGAGGGCATTGAAGGGTGTGGTGAGGCTTCAAGCTCTTGTCCGGGGTAGACTGGTGAGGAAGCAGGCTGCAGTGACGTTGCGATGCATGCAGGCCCTGGTTCGCGTTCAAGCGCGTGTGAGAGCCCGCAGGGTGAGAATGTCCGTTGAGGGGCAAGCAGTGCAGAACATGCTCAACCAGCGCCGCACCCAGGCTGAACTCTTGAAACAAGCTGAGGAAGGGTGGTGTGATAGCAAAGGAACATTGGAAGATGTCAAAACAAAACTACAGATGAGGCAAGAGGCAGCTCTCAAGAGAGAGAGAGCAATTGCATACTCTCTTGCTCACAAGCAATGGAGATCAAACCCCATCACCAATTCAAGAGCAACTGAGATAGAAAAGACTAATTCAGGCTGGAGTTGGTTGGAGCGTTGGATGGCGGCGAAGCCCTGGGAGAGTAGATTAATGGAACAACAACAACAAACACATGTAGCTGAGAATCAAGATCGCATCTTTAGGCAACACGGGTCAAGGTTGTCGTCACATGCTGAAGCCGCCTCAGATAAGACCCCTCCACTTCCAAAGAAATCAAATTCTAAAAAAACACCAGAACCATGCTCTGTCAAAGTCAGGAAGAACAATGTCACCACCAGGATTTCTGCTAGACCTTCTCAAATTGGGTCCTCAAGTCCAAGTTCTGAGTTTCAGTATGATGAGAGCTCTGCTTCATCTTCAATATGCACCGCATCTGCAACACCCAAATCAGGGAATGGTGCTGATGATAGTGGTAACAACAACACCAGACCTAGTTACATGAATCTAACTCAGTCAACCAAGGCAAAGCAAAAATCATGCAATTATCAACATCATCACCAATACAGCAGAGCTCAGAGGCTGCAGTCCATGGATGAGTTCCAGTTTCTGAAAAAGACCGCGGTATTCTCAAATGGGGATTCCAATAGCACTGCTTGTTCTGACCCTTCACTCCACTTTTCTAGGCCACTTTACTTACCAACCTACATGGATAAGAGGCCAAGATGA 1341 0.4892 MGASGKWVKALIGFKKPDNNVEGGGKSNKKWKLWKSFSGSGDKIGGGFRSDSEEGSQYSPRVPPSDAFTAAVATVVRAPPKDFKLLRLEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSVEGQAVQNMLNQRRTQAELLKQAEEGWCDSKGTLEDVKTKLQMRQEAALKRERAIAYSLAHKQWRSNPITNSRATEIEKTNSGWSWLERWMAAKPWESRLMEQQQQTHVAENQDRIFRQHGSRLSSHAEAASDKTPPLPKKSNSKKTPEPCSVKVRKNNVTTRISARPSQIGSSSPSSEFQYDESSASSSICTASATPKSGNGADDSGNNNTRPSYMNLTQSTKAKQKSCNYQHHHQYSRAQRLQSMDEFQFLKKTAVFSNGDSNSTACSDPSLHFSRPLYLPTYMDKRPR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2982 446 MobiDBLite consensus disorder prediction 292 392 - -
Lja5g2982 446 MobiDBLite consensus disorder prediction 276 392 - -
Lja5g2982 446 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Lja5g2982 446 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 443 - -
Lja5g2982 446 PANTHER IQ-DOMAIN 5-RELATED 1 443 - -
Lja5g2982 446 MobiDBLite consensus disorder prediction 41 63 - -
Lja5g2982 446 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Lja5g2982 446 SMART iq_5 110 131 IPR000048 GO:0005515
Lja5g2982 446 SMART iq_5 87 109 IPR000048 GO:0005515
Lja5g2982 446 Pfam IQ calmodulin-binding motif 112 129 IPR000048 GO:0005515
Lja5g2982 446 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2982 Lja-Chr5 58534129 58536914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2982 1 446 IQD Protein Family AT2G26180 53.145 9.36e-127 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2982 - - gmx:100787102 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2982 5 58534129 58536914 Lja1g4030 1 51061678 51064417 PCT